CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06780_001	Banana	cytosol	12.2	64.81
KRG90857	Soybean	nucleus	63.76	44.63
KRH35922	Soybean	nucleus	63.76	44.63
KRH65752	Soybean	cytosol	13.24	40.86
KRH69469	Soybean	nucleus	48.08	33.41
KRH74687	Soybean	nucleus	47.39	33.17
Os06t0237800-01	Rice	cytosol, nucleus	10.8	19.25
CDY71746	Canola	endoplasmic reticulum, extracellular	12.89	17.7
CDY34584	Canola	extracellular, mitochondrion, plasma membrane, vacuole	13.94	16.26
CDY62617	Canola	extracellular	10.8	15.5
KRH16828	Soybean	cytosol	6.27	13.04
KRH23998	Soybean	cytosol	5.57	13.01
KRH72437	Soybean	mitochondrion	6.97	12.9
KRH29318	Soybean	cytosol	5.57	12.8
CDY37476	Canola	extracellular, plasma membrane	9.06	11.21

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:26.3.1.3	UniProt:A0A0R0J3R4	EMBL:ACUP02004364	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G156900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0055085	GO:GO:1902600	EnsemblPlants:KRH49472	ProteinID:KRH49472	ProteinID:KRH49472.1	PFAM:PF03030
InterPro:PPase-energised_H-pump	PANTHER:PTHR44272	PANTHER:PTHR44272:SF2	MetaCyc:PWY-7805	MetaCyc:PWY-7807	UniParc:UPI0006EE085B

Description

hypothetical protein

Coordinates

chr7:+:19270769..19273095

Molecular Weight (calculated)

31878.3 Da

IEP (calculated)

4.936

GRAVY (calculated)

-0.123

Length

287 amino acids

Sequence
(BLAST)

001: MGGLFEAITG YGLGGSSMAL FGRVGGGIYT KAADVGADLV GKVERKIPED DPRNPARRQY DSAGFELFDV FIHILHDIVL FEMQQSLRCS TYTYQALDAD
101: SMDMEIDLSN LGTVNTMFTA LFSKMGVPIK TTISANVLEE ALNGTEDSEK TGKVTSAGMY FLHFQVYRMD STVNACYVQL AMAKDPEGAF FKRLEGLQPC
201: EVSELKPGTH IFAVYGDNFF KSASYMIEAV CAKSYEDTTQ KLKDIEAQIL RKRNELRQFE AEYRKVIILL SNQLSGCVIC DQVCKKP

Best Arabidopsis Sequence Match ( AT1G24120.1 )
(BLAST)

001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC

Arabidopsis Description

ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.