CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005476.1-P	Field mustard	cytosol	100.0	100.0
CDY27949	Canola	cytosol	96.72	96.72
CDY71923	Canola	cytosol	83.61	96.23
AT2G33735.1	Thale cress	cytosol	80.33	82.35
PGSC0003DMT400033584	Potato	cytosol	62.3	54.29
Solyc04g076080.2.1	Tomato	cytosol	60.66	52.86
GSMUA_Achr10P...	Banana	cytosol	56.56	52.27
KRH16828	Soybean	cytosol	58.2	51.45
EES07561	Sorghum	cytosol	54.1	50.77
VIT_18s0001g07260.t01	Wine grape	cytosol	56.56	50.0
TraesCS6B01G344500.1	Wheat	cytosol	53.28	50.0
TraesCS6D01G293800.1	Wheat	cytosol	53.28	49.62
TraesCS6A01G314500.1	Wheat	cytosol	52.46	48.85
Zm00001d018131_P004	Maize	cytosol	52.46	44.44
KRH72437	Soybean	mitochondrion	54.92	43.23
CDY49645	Canola	cytosol	41.8	40.8
CDX70703	Canola	cytosol	41.8	40.48
HORVU2Hr1G049750.1	Barley	cytosol	34.43	40.38
CDX69435	Canola	cytosol	40.98	40.0
CDX78701	Canola	cytosol	40.16	38.89
GSMUA_Achr7P10040_001	Banana	cytosol	19.67	36.92
GSMUA_Achr9P15090_001	Banana	cytosol	28.69	36.08
HORVU6Hr1G077430.1	Barley	cytosol	53.28	33.68
CDY53751	Canola	cytosol	40.98	31.85
CDY65889	Canola	cytosol	22.95	30.77
Os02t0760000-00	Rice	cytosol	54.92	28.27
CDY33230	Canola	endoplasmic reticulum, extracellular	38.52	26.4
CDY24259	Canola	cytosol	7.38	18.37
CDY59029	Canola	nucleus	31.97	9.51
CDX92921	Canola	extracellular, plasma membrane	15.57	9.41
CDX96027	Canola	nucleus	31.15	9.27
CDY44905	Canola	nucleus	31.15	9.27
CDY30918	Canola	cytosol	31.15	9.22
CDY45159	Canola	cytosol	31.15	9.2
CDX81506	Canola	nucleus	31.15	9.05
CDY50519	Canola	nucleus	29.51	8.85
CDY16243	Canola	nucleus	30.33	8.47
CDY60793	Canola	nucleus	29.51	8.33
CDY24260	Canola	plastid	16.39	7.97
CDY71746	Canola	endoplasmic reticulum, extracellular	11.48	6.7
CDY62617	Canola	extracellular	10.66	6.5
CDY34584	Canola	extracellular, mitochondrion, plasma membrane, vacuole	11.48	5.69
CDY50516	Canola	nucleus	16.39	5.68
CDY37476	Canola	extracellular, plasma membrane	9.02	4.74
CDY68909	Canola	nucleus	1.64	1.01

Protein Annotations

EnsemblPlants:CDY17195	EnsemblPlantsGene:GSBRNA2T00095259001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45504	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ProteinID:CDY17195	ProteinID:CDY17195.1	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000254730D
UniProt:A0A078FRQ1	MapMan:35.2	:	:	:	:

Description

BnaA05g09930DBnaA05g09930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRQ1]

Coordinates

chrLK032071:-:381726..382908

Molecular Weight (calculated)

14794.2 Da

IEP (calculated)

4.832

GRAVY (calculated)

-0.869

Length

122 amino acids

Sequence
(BLAST)

001: MWCSGWGDGH GSFLDFDFDF DNYKDHYKVL ELNSDASDDE IRSNFIRLAL KWHPDKLKEE DSATSRFQEI NEAYQVLSDP FTRQEYDKKR MRRIYEHNLE
101: LFDRYKELIF TCNGLGMKNF LW

Best Arabidopsis Sequence Match ( AT2G33735.1 )
(BLAST)

001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RYC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.