Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78701 | Canola | cytosol | 55.62 | 78.57 |
| CDX70703 | Canola | cytosol | 55.06 | 77.78 |
| CDX69435 | Canola | cytosol | 53.37 | 76.0 |
| CDY49645 | Canola | cytosol | 53.37 | 76.0 |
| VIT_16s0039g01520.t01 | Wine grape | cytosol | 43.82 | 63.41 |
| Solyc03g097240.2.1 | Tomato | cytosol | 42.7 | 60.8 |
| PGSC0003DMT400068101 | Potato | cytosol | 42.13 | 60.0 |
| KRH23998 | Soybean | cytosol | 41.01 | 59.35 |
| KRH29318 | Soybean | cytosol | 41.57 | 59.2 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 39.89 | 59.17 |
| AT5G16650.2 | Thale cress | cytosol | 54.49 | 58.08 |
| Os02t0693200-01 | Rice | cytosol | 39.33 | 57.85 |
| EES05690 | Sorghum | cytosol | 39.33 | 57.38 |
| CDY53751 | Canola | cytosol | 49.44 | 56.05 |
| TraesCS6D01G250300.1 | Wheat | cytosol | 37.64 | 55.37 |
| TraesCS6A01G264600.1 | Wheat | cytosol | 37.08 | 54.55 |
| HORVU6Hr1G067130.1 | Barley | cytosol | 37.08 | 54.55 |
| Zm00001d017685_P006 | Maize | cytosol | 38.76 | 48.94 |
| CDY71923 | Canola | cytosol | 24.72 | 41.51 |
| CDY17195 | Canola | cytosol | 26.4 | 38.52 |
| CDY27949 | Canola | cytosol | 25.84 | 37.7 |
| CDY65889 | Canola | cytosol | 16.29 | 31.87 |
| CDY24259 | Canola | cytosol | 5.62 | 20.41 |
| CDX92921 | Canola | extracellular, plasma membrane | 15.17 | 13.37 |
| CDX96027 | Canola | nucleus | 25.84 | 11.22 |
| CDY59029 | Canola | nucleus | 25.28 | 10.98 |
| CDY44905 | Canola | nucleus | 24.72 | 10.73 |
| CDX81506 | Canola | nucleus | 24.72 | 10.48 |
| CDY50519 | Canola | nucleus | 23.6 | 10.32 |
| CDY24260 | Canola | plastid | 14.04 | 9.96 |
| CDY60793 | Canola | nucleus | 23.6 | 9.72 |
| CDY16243 | Canola | nucleus | 23.6 | 9.61 |
| CDY30918 | Canola | cytosol | 20.22 | 8.74 |
| CDY45159 | Canola | cytosol | 20.22 | 8.72 |
| CDY62617 | Canola | extracellular | 8.99 | 8.0 |
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 8.43 | 7.18 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 9.55 | 6.91 |
| CDY50516 | Canola | nucleus | 12.92 | 6.53 |
| CDY37476 | Canola | extracellular, plasma membrane | 7.3 | 5.6 |
| CDY68909 | Canola | nucleus | 1.12 | 1.01 |
Protein Annotations
| EnsemblPlants:CDY33230 | EnsemblPlantsGene:GSBRNA2T00053985001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45292 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDY33230 |
| ProteinID:CDY33230.1 | SignalP:SignalP-noTM | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EDD4F3 | UniProt:A0A078H3L2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC01g37030DBnaC01g37030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3L2]
Coordinates
chrLK032309:+:152698..154366
Molecular Weight (calculated)
20441.9 Da
IEP (calculated)
7.361
GRAVY (calculated)
-0.216
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLISGLLIS LWFLVKRGKE LLLRDRCPVG REVSCFNHGR FLLSSSLCPI EDNDKSPPSP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDSAA
101: SEKFIEINDA YNVDLLKLHE YDLTGIYEIH KNTLREYLAR FKGMILTCNG LGIIQSSSPC IKAEVRGELC LCCTKLEP
101: SEKFIEINDA YNVDLLKLHE YDLTGIYEIH KNTLREYLAR FKGMILTCNG LGIIQSSSPC IKAEVRGELC LCCTKLEP
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.