Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P10040_001 | Banana | cytosol | 40.21 | 60.0 |
| GSMUA_Achr10P... | Banana | cytosol | 52.58 | 38.64 |
| HORVU2Hr1G049750.1 | Barley | cytosol | 40.21 | 37.5 |
| KRH16828 | Soybean | cytosol | 52.58 | 36.96 |
| PGSC0003DMT400033584 | Potato | cytosol | 52.58 | 36.43 |
| VIT_18s0001g07260.t01 | Wine grape | cytosol | 51.55 | 36.23 |
| Solyc04g076080.2.1 | Tomato | cytosol | 51.55 | 35.71 |
| CDY71923 | Canola | cytosol | 32.99 | 30.19 |
| AT2G33735.1 | Thale cress | cytosol | 36.08 | 29.41 |
| CDY27949 | Canola | cytosol | 36.08 | 28.69 |
| CDY17195 | Canola | cytosol | 36.08 | 28.69 |
| Bra005476.1-P | Field mustard | cytosol | 36.08 | 28.69 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 32.99 | 26.67 |
| KRH72437 | Soybean | mitochondrion | 42.27 | 26.45 |
| GSMUA_Achr3P06010_001 | Banana | cytosol | 22.68 | 5.24 |
| GSMUA_Achr4P13770_001 | Banana | cytosol | 20.62 | 4.93 |
| GSMUA_Achr8P31640_001 | Banana | cytosol | 19.59 | 4.66 |
| GSMUA_Achr9P14460_001 | Banana | cytosol, nucleus, plastid | 22.68 | 4.3 |
| GSMUA_Achr9P21410_001 | Banana | nucleus | 20.62 | 3.29 |
| GSMUA_Achr4P06780_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P15090_001 | EnsemblPlants:GSMUA_Achr9T15090_001 | EnsemblPlantsGene:GSMUA_Achr9G15090_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45504 | PFAM:PF00226 | PFscan:PS50076 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0002948505 | UniProt:M0U0G7 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G15090_001]
Coordinates
chr9:-:9887112..9889423
Molecular Weight (calculated)
11707.7 Da
IEP (calculated)
4.451
GRAVY (calculated)
-0.745
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MWWDEDDDRE AFAALEEEEE EGQDFYSPFG FLSLLSRPKD YYKILEVDYD ATEEAIRSNF IRLALKWHPD KKRETMLLRD SKISMRHTRI LSCVQLQ
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.