Factsheet for PGSC0003DMT400015325

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007370.2.1	Tomato	cytosol	98.63	87.2
PGSC0003DMT400037773	Potato	cytosol	86.07	76.27
VIT_01s0011g03790.t01	Wine grape	nucleus	84.15	74.22
KRH35922	Soybean	nucleus	82.79	73.9
KRG90857	Soybean	nucleus	82.51	73.66
Bra033942.1-P	Field mustard	nucleus	80.87	72.2
CDY44905	Canola	nucleus	80.87	72.2
AT1G68370.1	Thale cress	nucleus	79.78	71.22
CDX96027	Canola	nucleus	79.78	71.22
CDY59029	Canola	nucleus	79.78	71.22
Bra004301.1-P	Field mustard	nucleus	78.14	70.97
Os01t0512100-01	Rice	plasma membrane	77.32	70.22
CDX81506	Canola	nucleus	80.33	70.0
TraesCS3D01G201400.2	Wheat	cytosol	77.6	69.61
TraesCS3A01G202200.1	Wheat	cytosol	77.05	69.12
EES16141	Sorghum	nucleus	76.5	68.63
GSMUA_Achr4P13770_001	Banana	cytosol	75.96	68.47
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	75.96	68.3
HORVU3Hr1G042500.2	Barley	plastid	75.96	59.53
PGSC0003DMT400040316	Potato	nucleus	57.65	51.21
GSMUA_Achr9P21410_001	Banana	nucleus	69.67	41.94
PGSC0003DMT400068101	Potato	cytosol	8.2	24.0
PGSC0003DMT400033584	Potato	cytosol	7.1	18.57
Os03t0262500-01	Rice	plasma membrane, plastid	4.64	9.09

Protein Annotations

EnsemblPlants:PGSC0003DMT400015325	EnsemblPlantsGene:PGSC0003DMG400005976	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44272	PGSC:PGSC0003DMG400005976	PRINTS:PR00625	SEG:seg
SUPFAM:SSF46565	UniParc:UPI000294DD5F	UniProt:M1A5V0	MapMan:26.3.1.3	:	:

Description

Chaperone protein dnaJ 15 [Source:PGSC_GENE;Acc:PGSC0003DMG400005976]

Coordinates

chr4:-:1710526..1718731

Molecular Weight (calculated)

40412.6 Da

IEP (calculated)

5.760

GRAVY (calculated)

-0.398

Length

366 amino acids

Sequence
(BLAST)

001: MLTIPEASEL FKEVAYSYGV LSDPEKRRQY DMAGFEAIDA EGTDMEIDLS NLGTVNTMFA ALFSKLGVPI KTTVSANVLE EALNGTVTIR PLPIGTSLSG
101: KVEKQSAHFF GVTISNEQAE AGLVVRVTSA AQSKFKLLYF EQDANGGYGL ALQEDSEKTG KVTSAGMYFL HFQVYRMDST VNALAMAKDP EAAFFKKLEG
201: LQPCEVSELK AGTHIFAVYG DNFFKPATYI IEALCAKSYE DTTVKLKEIE AQILRKRNEL RQFEIEYRKA LAHFQEVTNR YSQEKLSVDE MLKQRDSIHS
301: SFTVSRSIAN LSGSGSGHFS NGSSSKVLGE DYKTDSPGED GSSDSKDKSS KKRWFNLNLK GSDKKN

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.