Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G087050.1 | Barley | cytosol | 54.9 | 13.56 |
| Bra020005.1-P | Field mustard | cytosol | 53.92 | 13.32 |
| AT1G57720.1 | Thale cress | cytosol | 52.94 | 13.08 |
| Bra031676.1-P | Field mustard | cytosol | 52.94 | 13.08 |
| AT1G09640.1 | Thale cress | cytosol | 52.94 | 13.04 |
| Bra030790.1-P | Field mustard | cytosol | 54.9 | 9.89 |
| Solyc11g028090.1.1 | Tomato | extracellular, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.70.1010 | MapMan:35.1 | UniProt:A0A287TZU4 | InterPro:EF1B_G_C | InterPro:EF1B_G_C_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006414 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G039770 | EnsemblPlants:HORVU6Hr1G039770.1 | InterPro:IPR001662 | InterPro:IPR036433 | PFAM:PF00647 | PFscan:PS50040 |
| PANTHER:PTHR44372 | SMART:SM01183 | SUPFAM:SSF89942 | UniParc:UPI000B47D19A | : | : |
Description
No Description!
Coordinates
chrchr6H:-:208412543..208421682
Molecular Weight (calculated)
12272.1 Da
IEP (calculated)
10.513
GRAVY (calculated)
-0.334
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MYDLESYSMW FRDFKYNEEN TVSFVTMNKV RGFLQLMDLC RKYAFWKMLV MGSEPPFKGK GLWLFQDLGI PSFSWTRCMT WPSMTGQRLI SVMRRRRSAR
101: AP
101: AP
001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK
Arabidopsis Description
Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.