Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G09640.1 | Thale cress | cytosol | 87.65 | 87.44 |
GSMUA_Achr8P15790_001 | Banana | cytosol | 8.96 | 84.09 |
Os02t0220500-01 | Rice | plasma membrane | 78.21 | 78.02 |
Os02t0220600-02 | Rice | extracellular, plasma membrane | 78.45 | 77.51 |
EES04758 | Sorghum | plastid | 77.0 | 76.08 |
GSMUA_Achr9P25030_001 | Banana | cytosol | 66.59 | 75.14 |
KRH01866 | Soybean | nucleus | 76.03 | 74.76 |
GSMUA_Achr9P11470_001 | Banana | cytosol | 69.49 | 74.74 |
VIT_18s0041g01900.t01 | Wine grape | cytosol | 76.27 | 74.29 |
EER89969 | Sorghum | cytosol | 74.33 | 73.62 |
KRH51299 | Soybean | cytosol, endoplasmic reticulum, nucleus | 74.58 | 73.33 |
KRH06050 | Soybean | endoplasmic reticulum | 74.33 | 73.27 |
KRH26289 | Soybean | nucleus | 74.09 | 73.21 |
Zm00001d046352_P001 | Maize | plasma membrane | 73.85 | 73.14 |
Os06t0571400-01 | Rice | plasma membrane | 73.61 | 73.08 |
Zm00001d036959_P003 | Maize | cytosol | 73.37 | 72.66 |
Zm00001d016358_P006 | Maize | cytosol | 74.33 | 72.41 |
VIT_12s0035g01130.t01 | Wine grape | cytosol | 75.79 | 72.29 |
PGSC0003DMT400065617 | Potato | cytosol | 71.91 | 71.74 |
Zm00001d053576_P001 | Maize | endoplasmic reticulum | 75.79 | 71.62 |
PGSC0003DMT400040683 | Potato | cytosol | 71.19 | 71.19 |
TraesCS7B01G266300.1 | Wheat | cytosol, golgi, plastid, unclear | 70.46 | 70.98 |
Solyc06g011280.2.1 | Tomato | extracellular | 70.94 | 70.94 |
TraesCS7A01G362900.1 | Wheat | golgi | 70.7 | 70.7 |
TraesCS7D01G360200.2 | Wheat | nucleus, plastid | 70.7 | 70.7 |
HORVU7Hr1G087050.1 | Barley | cytosol | 70.46 | 70.46 |
GSMUA_Achr9P19980_001 | Banana | cytosol | 6.78 | 70.0 |
Solyc11g028100.1.1 | Tomato | cytosol, unclear | 69.98 | 69.81 |
TraesCS6B01G215000.1 | Wheat | cytosol | 71.19 | 69.5 |
TraesCS6A01G186000.1 | Wheat | cytosol | 70.46 | 68.79 |
GSMUA_Achr9P19970_001 | Banana | cytosol, mitochondrion | 14.53 | 54.55 |
HORVU6Hr1G039770.1 | Barley | cytosol | 13.08 | 52.94 |
GSMUA_Achr2P13820_001 | Banana | cytosol, endoplasmic reticulum, peroxisome, plastid | 43.34 | 47.73 |
GSMUA_Achr8P15800_001 | Banana | extracellular | 7.51 | 45.59 |
VIT_12s0035g01120.t01 | Wine grape | plastid | 48.67 | 44.27 |
Solyc11g028090.1.1 | Tomato | extracellular, plastid | 21.55 | 44.06 |
Protein Annotations
Gene3D:1.20.1050.10 | MapMan:17.5.1.2.2 | Gene3D:3.30.70.1010 | Gene3D:3.40.30.10 | EntrezGene:842147 | UniProt:A0A178WGF2 |
ProteinID:AAG50755.1 | ProteinID:AEE33455.1 | ProteinID:AEE33456.1 | EMBL:AF370502 | EMBL:AF424630 | EMBL:AF428347 |
ArrayExpress:AT1G57720 | EnsemblPlantsGene:AT1G57720 | RefSeq:AT1G57720 | TAIR:AT1G57720 | RefSeq:AT1G57720-TAIR-G | EnsemblPlants:AT1G57720.1 |
TAIR:AT1G57720.1 | EMBL:AY035082 | EMBL:AY064630 | EMBL:AY085256 | EMBL:AY113043 | EMBL:BT000973 |
InterPro:EF1B_G_C | InterPro:EF1B_G_C_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 |
GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 |
GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0006414 | GO:GO:0006749 | GO:GO:0008135 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010043 |
GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030312 | GO:GO:0046686 | InterPro:GST_C |
InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR001662 | InterPro:IPR004045 | InterPro:IPR010987 |
InterPro:IPR036433 | RefSeq:NP_001031202.1 | RefSeq:NP_176084.1 | ProteinID:OAP17326.1 | PFAM:PF00043 | PFAM:PF00647 |
PFAM:PF02798 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001170 | PO:PO:0007131 | PO:PO:0009005 |
PO:PO:0009010 | PO:PO:0009025 | PO:PO:0020030 | PFscan:PS50040 | PFscan:PS50404 | PFscan:PS50405 |
PANTHER:PTHR44372 | PANTHER:PTHR44372:SF2 | UniProt:Q9FVT2 | SMART:SM01183 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
SUPFAM:SSF89942 | InterPro:Thioredoxin-like_sf | UniParc:UPI0000000993 | SEG:seg | : | : |
Description
Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
Coordinates
chr1:+:21377320..21380379
Molecular Weight (calculated)
46402.7 Da
IEP (calculated)
5.404
GRAVY (calculated)
-0.350
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.