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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G09640.1 Thale cress cytosol 87.65 87.44
GSMUA_Achr8P15790_001 Banana cytosol 8.96 84.09
Os02t0220500-01 Rice plasma membrane 78.21 78.02
Os02t0220600-02 Rice extracellular, plasma membrane 78.45 77.51
EES04758 Sorghum plastid 77.0 76.08
GSMUA_Achr9P25030_001 Banana cytosol 66.59 75.14
KRH01866 Soybean nucleus 76.03 74.76
GSMUA_Achr9P11470_001 Banana cytosol 69.49 74.74
VIT_18s0041g01900.t01 Wine grape cytosol 76.27 74.29
EER89969 Sorghum cytosol 74.33 73.62
KRH51299 Soybean cytosol, endoplasmic reticulum, nucleus 74.58 73.33
KRH06050 Soybean endoplasmic reticulum 74.33 73.27
KRH26289 Soybean nucleus 74.09 73.21
Zm00001d046352_P001 Maize plasma membrane 73.85 73.14
Os06t0571400-01 Rice plasma membrane 73.61 73.08
Zm00001d036959_P003 Maize cytosol 73.37 72.66
Zm00001d016358_P006 Maize cytosol 74.33 72.41
VIT_12s0035g01130.t01 Wine grape cytosol 75.79 72.29
PGSC0003DMT400065617 Potato cytosol 71.91 71.74
Zm00001d053576_P001 Maize endoplasmic reticulum 75.79 71.62
PGSC0003DMT400040683 Potato cytosol 71.19 71.19
TraesCS7B01G266300.1 Wheat cytosol, golgi, plastid, unclear 70.46 70.98
Solyc06g011280.2.1 Tomato extracellular 70.94 70.94
TraesCS7A01G362900.1 Wheat golgi 70.7 70.7
TraesCS7D01G360200.2 Wheat nucleus, plastid 70.7 70.7
HORVU7Hr1G087050.1 Barley cytosol 70.46 70.46
GSMUA_Achr9P19980_001 Banana cytosol 6.78 70.0
Solyc11g028100.1.1 Tomato cytosol, unclear 69.98 69.81
TraesCS6B01G215000.1 Wheat cytosol 71.19 69.5
TraesCS6A01G186000.1 Wheat cytosol 70.46 68.79
GSMUA_Achr9P19970_001 Banana cytosol, mitochondrion 14.53 54.55
HORVU6Hr1G039770.1 Barley cytosol 13.08 52.94
GSMUA_Achr2P13820_001 Banana cytosol, endoplasmic reticulum, peroxisome, plastid 43.34 47.73
GSMUA_Achr8P15800_001 Banana extracellular 7.51 45.59
VIT_12s0035g01120.t01 Wine grape plastid 48.67 44.27
Solyc11g028090.1.1 Tomato extracellular, plastid 21.55 44.06
Protein Annotations
Gene3D:1.20.1050.10MapMan:17.5.1.2.2Gene3D:3.30.70.1010Gene3D:3.40.30.10EntrezGene:842147UniProt:A0A178WGF2
ProteinID:AAG50755.1ProteinID:AEE33455.1ProteinID:AEE33456.1EMBL:AF370502EMBL:AF424630EMBL:AF428347
ArrayExpress:AT1G57720EnsemblPlantsGene:AT1G57720RefSeq:AT1G57720TAIR:AT1G57720RefSeq:AT1G57720-TAIR-GEnsemblPlants:AT1G57720.1
TAIR:AT1G57720.1EMBL:AY035082EMBL:AY064630EMBL:AY085256EMBL:AY113043EMBL:BT000973
InterPro:EF1B_G_CInterPro:EF1B_G_C_sfGO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003746
GO:GO:0003824GO:GO:0004364GO:GO:0005488GO:GO:0005507GO:GO:0005515GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005773
GO:GO:0005829GO:GO:0005886GO:GO:0006412GO:GO:0006414GO:GO:0006749GO:GO:0008135
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009506GO:GO:0009987GO:GO:0010043
GO:GO:0016020GO:GO:0016740GO:GO:0019538GO:GO:0030312GO:GO:0046686InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR001662InterPro:IPR004045InterPro:IPR010987
InterPro:IPR036433RefSeq:NP_001031202.1RefSeq:NP_176084.1ProteinID:OAP17326.1PFAM:PF00043PFAM:PF00647
PFAM:PF02798PO:PO:0000005PO:PO:0000293PO:PO:0001170PO:PO:0007131PO:PO:0009005
PO:PO:0009010PO:PO:0009025PO:PO:0020030PFscan:PS50040PFscan:PS50404PFscan:PS50405
PANTHER:PTHR44372PANTHER:PTHR44372:SF2UniProt:Q9FVT2SMART:SM01183SUPFAM:SSF47616SUPFAM:SSF52833
SUPFAM:SSF89942InterPro:Thioredoxin-like_sfUniParc:UPI0000000993SEG:seg::
Description
Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
Coordinates
chr1:+:21377320..21380379
Molecular Weight (calculated)
46402.7 Da
IEP (calculated)
5.404
GRAVY (calculated)
-0.350
Length
413 amino acids
Sequence
(BLAST)
001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.