Factsheet for GSMUA_Achr9P19970_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15800_001	Banana	extracellular	20.91	33.82
GSMUA_Achr9P25030_001	Banana	cytosol	63.64	19.13
GSMUA_Achr9P11470_001	Banana	cytosol	61.82	17.71
Os02t0220500-01	Rice	plasma membrane	60.91	16.18
Os02t0220600-02	Rice	extracellular, plasma membrane	60.91	16.03
VIT_18s0041g01900.t01	Wine grape	cytosol	60.91	15.8
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	53.64	15.73
EES04758	Sorghum	plastid	59.09	15.55
VIT_12s0035g01130.t01	Wine grape	cytosol	60.0	15.24
AT1G09640.1	Thale cress	cytosol	57.27	15.22
Zm00001d016358_P006	Maize	cytosol	58.18	15.09
Zm00001d053576_P001	Maize	endoplasmic reticulum	59.09	14.87
Zm00001d036959_P003	Maize	cytosol	55.45	14.63
EER89969	Sorghum	cytosol	55.45	14.63
AT1G57720.1	Thale cress	cytosol	54.55	14.53
Bra020005.1-P	Field mustard	cytosol	54.55	14.53
Bra031676.1-P	Field mustard	cytosol	54.55	14.53
TraesCS6B01G215000.1	Wheat	cytosol	55.45	14.42
TraesCS6A01G186000.1	Wheat	cytosol	55.45	14.42
PGSC0003DMT400040683	Potato	cytosol	53.64	14.29
Os06t0571400-01	Rice	plasma membrane	53.64	14.18
Zm00001d046352_P001	Maize	plasma membrane	53.64	14.15
Solyc06g011280.2.1	Tomato	extracellular	52.73	14.04
TraesCS7D01G360200.2	Wheat	nucleus, plastid	52.73	14.04
HORVU7Hr1G087050.1	Barley	cytosol	52.73	14.04
Solyc11g028100.1.1	Tomato	cytosol, unclear	52.73	14.01
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	51.82	13.9
TraesCS7A01G362900.1	Wheat	golgi	51.82	13.8
PGSC0003DMT400065617	Potato	cytosol	50.91	13.53
Bra030790.1-P	Field mustard	cytosol	53.64	10.42
GSMUA_Achr8P15790_001	Banana	cytosol	1.82	4.55
GSMUA_Achr9P19980_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P19970_001	EnsemblPlants:GSMUA_Achr9T19970_001	EnsemblPlantsGene:GSMUA_Achr9G19970_001	Gene3D:1.20.1050.10	Gene3D:3.40.30.10	InterPro:Glutathione-S-Trfase_C_sf
PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SUPFAM:SSF47616	UniParc:UPI000296AE6C	UniProt:M0U1V6	MapMan:35.1

Description

Elongation factor 1-gamma 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19970_001]

Coordinates

chr9:+:22769043..22769715

Molecular Weight (calculated)

12199.6 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.122

Length

110 amino acids

Sequence
(BLAST)

001: MGVANKTSWF LKMNPIGKAP VLETPDLTRS KADNPLYGTS LVEYAHIEQW IDFAPTEIAP RVGFGPYLAG SVEEAAISSL KRALGALNTH LTSNISRRPC
101: CYFGRYFYDL

Best Arabidopsis Sequence Match ( AT1G09640.2 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVKGLWLFRG PEIPKFIMDE VYDMELYEWT KVDISDEAQK ERVSQMIEDA EPFEGEALLD AKCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.