Factsheet for GSMUA_Achr9P11470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P25030_001	Banana	cytosol	85.42	89.62
GSMUA_Achr8P15790_001	Banana	cytosol	10.16	88.64
Os02t0220500-01	Rice	plasma membrane	83.59	77.54
EES04758	Sorghum	plastid	82.81	76.08
Os02t0220600-02	Rice	extracellular, plasma membrane	82.81	76.08
Zm00001d016358_P006	Maize	cytosol	81.51	73.82
Os06t0571400-01	Rice	plasma membrane	79.95	73.8
EER89969	Sorghum	cytosol	79.95	73.62
Zm00001d046352_P001	Maize	plasma membrane	79.17	72.9
Zm00001d036959_P003	Maize	cytosol	79.17	72.9
GSMUA_Achr9P19980_001	Banana	cytosol	7.55	72.5
VIT_18s0041g01900.t01	Wine grape	cytosol	79.95	72.41
TraesCS6B01G215000.1	Wheat	cytosol	79.69	72.34
Zm00001d053576_P001	Maize	endoplasmic reticulum	82.03	72.08
TraesCS6A01G186000.1	Wheat	cytosol	78.65	71.39
VIT_12s0035g01130.t01	Wine grape	cytosol	80.47	71.36
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	75.78	70.98
TraesCS7D01G360200.2	Wheat	nucleus, plastid	76.3	70.94
TraesCS7A01G362900.1	Wheat	golgi	76.04	70.7
AT1G09640.1	Thale cress	cytosol	75.52	70.05
Solyc11g028100.1.1	Tomato	cytosol, unclear	75.52	70.05
PGSC0003DMT400040683	Potato	cytosol	75.26	69.98
HORVU7Hr1G087050.1	Barley	cytosol	75.26	69.98
PGSC0003DMT400065617	Potato	cytosol	75.0	69.57
AT1G57720.1	Thale cress	cytosol	74.74	69.49
Solyc06g011280.2.1	Tomato	extracellular	74.48	69.25
Bra031676.1-P	Field mustard	cytosol	74.48	69.25
Bra020005.1-P	Field mustard	cytosol	74.22	69.01
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	17.71	61.82
GSMUA_Achr8P15800_001	Banana	extracellular	9.9	55.88
Bra030790.1-P	Field mustard	cytosol	72.66	49.29
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	45.57	46.67

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.30.70.1010	Gene3D:3.40.30.10	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0005515
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G11470_001	EnsemblPlants:GSMUA_Achr9P11470_001	EnsemblPlants:GSMUA_Achr9T11470_001	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR001662	InterPro:IPR004045	InterPro:IPR010987
InterPro:IPR036433	UniProt:M0TZF6	PFAM:PF00043	PFAM:PF00647	PFAM:PF02798	PFscan:PS50040
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SMART:SM01183	SUPFAM:SSF47616
SUPFAM:SSF52833	SUPFAM:SSF89942	InterPro:Thioredoxin-like_sf	UniParc:UPI000295D0B6	SEG:seg	:

Description

Elongation factor 1-gamma 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11470_001]

Coordinates

chr9:-:7441991..7445339

Molecular Weight (calculated)

43957.9 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.371

Length

384 amino acids

Sequence
(BLAST)

001: MGVSNKTPEF LKMNPIGKVP VLETPDGPVF ESNAIARYVT RLKADNPLYG SSLIEYAHIE QWIDFASMEV DANIARWLYP RLGYMPYHAV AEEVAASSLK
101: RALGALNTHL ASNTYLVGHS VTLADIIMIC NLYHGFSLLL LKSVTSEFPH VERYFWTMVN QPNFRKVLGE VKQADSVPPV PSQKKPAKEP AKPKEVKKEP
201: KQEPVKPKVQ EVVEEEEEAP KPKPKNPLDL LPPSKMILDE WKRLYSNTKT NFREVAIKGF WDMYDPEGYS LWFCDYKYND ENTVSFVTLN KVSGFLQRMD
301: LARKYAFGKM LVIGSDPPFK VKGVWLFRGL EIPKFVLDEV YDMELYDWAK VDISDEAQKE RVNAMIEDQE PFEGEALLDA KCFK

Best Arabidopsis Sequence Match ( AT1G09640.1 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.