Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d046352_P001 | Maize | plasma membrane | 96.64 | 96.64 |
Zm00001d036959_P003 | Maize | cytosol | 95.68 | 95.68 |
Os06t0571400-01 | Rice | plasma membrane | 85.85 | 86.06 |
EES04758 | Sorghum | plastid | 84.65 | 84.45 |
GSMUA_Achr9P11470_001 | Banana | cytosol | 73.62 | 79.95 |
TraesCS7B01G266300.1 | Wheat | cytosol, golgi, plastid, unclear | 78.18 | 79.51 |
GSMUA_Achr9P25030_001 | Banana | cytosol | 69.54 | 79.23 |
TraesCS7D01G360200.2 | Wheat | nucleus, plastid | 78.18 | 78.93 |
TraesCS7A01G362900.1 | Wheat | golgi | 78.18 | 78.93 |
HORVU7Hr1G087050.1 | Barley | cytosol | 77.94 | 78.69 |
VIT_18s0041g01900.t01 | Wine grape | cytosol | 79.62 | 78.3 |
Bra031676.1-P | Field mustard | cytosol | 74.34 | 75.06 |
Solyc11g028100.1.1 | Tomato | cytosol, unclear | 74.1 | 74.64 |
VIT_12s0035g01130.t01 | Wine grape | cytosol | 77.46 | 74.6 |
AT1G57720.1 | Thale cress | cytosol | 73.62 | 74.33 |
AT1G09640.1 | Thale cress | cytosol | 73.62 | 74.15 |
Bra020005.1-P | Field mustard | cytosol | 73.38 | 74.09 |
KRH06050 | Soybean | endoplasmic reticulum | 74.34 | 73.99 |
PGSC0003DMT400040683 | Potato | cytosol | 73.14 | 73.85 |
KRH01866 | Soybean | nucleus | 74.34 | 73.81 |
KRH26289 | Soybean | nucleus | 73.86 | 73.68 |
PGSC0003DMT400065617 | Potato | cytosol | 73.14 | 73.67 |
Solyc06g011280.2.1 | Tomato | extracellular | 72.66 | 73.37 |
KRH51299 | Soybean | cytosol, endoplasmic reticulum, nucleus | 73.38 | 72.86 |
GSMUA_Achr9P19970_001 | Banana | cytosol, mitochondrion | 14.63 | 55.45 |
Bra030790.1-P | Field mustard | cytosol | 71.94 | 53.0 |
GSMUA_Achr2P13820_001 | Banana | cytosol, endoplasmic reticulum, peroxisome, plastid | 43.65 | 48.53 |
CDY04368 | Canola | cytosol | 24.46 | 38.78 |
Protein Annotations
Gene3D:1.20.1050.10 | MapMan:17.5.1.2.2 | Gene3D:3.30.70.1010 | Gene3D:3.40.30.10 | EntrezGene:8079301 | UniProt:C5Z529 |
EnsemblPlants:EER89969 | ProteinID:EER89969 | ProteinID:EER89969.1 | InterPro:EF1B_G_C | InterPro:EF1B_G_C_sf | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
GO:GO:0006412 | GO:GO:0006414 | GO:GO:0006749 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | InterPro:GST_C | InterPro:Glutathione-S-Trfase_C-like |
InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR001662 | InterPro:IPR004045 | InterPro:IPR010987 | InterPro:IPR036433 |
PFAM:PF00043 | PFAM:PF00647 | PFAM:PF02798 | PFscan:PS50040 | PFscan:PS50404 | PFscan:PS50405 |
PANTHER:PTHR44372 | PANTHER:PTHR44372:SF2 | SMART:SM01183 | EnsemblPlantsGene:SORBI_3010G173100 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
SUPFAM:SSF89942 | unigene:Sbi.14154 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001A898B9 | RefSeq:XP_002438602.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:50836164..50840275
Molecular Weight (calculated)
47092.5 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.358
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVLHSGAG NKNAFKALIA AEYSGVKVEL TKDFEMGVSN KTPEFLKMNP LGKVPVLETP DGAVFESNAI ARYVARLKDD NPLFGSSRIE QAHVEQWVDF
101: AATEVDPGVA WYLYPRLGFI PYAHTTEETA IASLKRSLGA LNTHLASNTY LVGHSVTLAD IVLTCNLYHG IARILTKSFT SDFPHVERYF WTMVNQPNFK
201: KVIGEVKQAE SVPPVQKKAA PPKEPKAKDV KKEAPKEAPK PKVVEAPAEE EAPKPKPKNP LDLLPPSKMV LDDWKRLYSN TKTNFREVAI KGFWDMYDPE
301: GYSLWFCDYK YNDENTVSFV TLNKVGGFLQ RMDLARKYAF GKMLVIGSEA PFKLKGLWLF RGQEVPKFVM DEVYDMELYE WTKVDISDEA QKERVNAMIE
401: DQEPFEGEAL LDAKCFK
101: AATEVDPGVA WYLYPRLGFI PYAHTTEETA IASLKRSLGA LNTHLASNTY LVGHSVTLAD IVLTCNLYHG IARILTKSFT SDFPHVERYF WTMVNQPNFK
201: KVIGEVKQAE SVPPVQKKAA PPKEPKAKDV KKEAPKEAPK PKVVEAPAEE EAPKPKPKNP LDLLPPSKMV LDDWKRLYSN TKTNFREVAI KGFWDMYDPE
301: GYSLWFCDYK YNDENTVSFV TLNKVGGFLQ RMDLARKYAF GKMLVIGSEA PFKLKGLWLF RGQEVPKFVM DEVYDMELYE WTKVDISDEA QKERVNAMIE
401: DQEPFEGEAL LDAKCFK
001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK
Arabidopsis Description
Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.