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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 2
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046352_P001 Maize plasma membrane 96.64 96.64
Zm00001d036959_P003 Maize cytosol 95.68 95.68
Os06t0571400-01 Rice plasma membrane 85.85 86.06
EES04758 Sorghum plastid 84.65 84.45
GSMUA_Achr9P11470_001 Banana cytosol 73.62 79.95
TraesCS7B01G266300.1 Wheat cytosol, golgi, plastid, unclear 78.18 79.51
GSMUA_Achr9P25030_001 Banana cytosol 69.54 79.23
TraesCS7D01G360200.2 Wheat nucleus, plastid 78.18 78.93
TraesCS7A01G362900.1 Wheat golgi 78.18 78.93
HORVU7Hr1G087050.1 Barley cytosol 77.94 78.69
VIT_18s0041g01900.t01 Wine grape cytosol 79.62 78.3
Bra031676.1-P Field mustard cytosol 74.34 75.06
Solyc11g028100.1.1 Tomato cytosol, unclear 74.1 74.64
VIT_12s0035g01130.t01 Wine grape cytosol 77.46 74.6
AT1G57720.1 Thale cress cytosol 73.62 74.33
AT1G09640.1 Thale cress cytosol 73.62 74.15
Bra020005.1-P Field mustard cytosol 73.38 74.09
KRH06050 Soybean endoplasmic reticulum 74.34 73.99
PGSC0003DMT400040683 Potato cytosol 73.14 73.85
KRH01866 Soybean nucleus 74.34 73.81
KRH26289 Soybean nucleus 73.86 73.68
PGSC0003DMT400065617 Potato cytosol 73.14 73.67
Solyc06g011280.2.1 Tomato extracellular 72.66 73.37
KRH51299 Soybean cytosol, endoplasmic reticulum, nucleus 73.38 72.86
GSMUA_Achr9P19970_001 Banana cytosol, mitochondrion 14.63 55.45
Bra030790.1-P Field mustard cytosol 71.94 53.0
GSMUA_Achr2P13820_001 Banana cytosol, endoplasmic reticulum, peroxisome, plastid 43.65 48.53
CDY04368 Canola cytosol 24.46 38.78
Protein Annotations
Gene3D:1.20.1050.10MapMan:17.5.1.2.2Gene3D:3.30.70.1010Gene3D:3.40.30.10EntrezGene:8079301UniProt:C5Z529
EnsemblPlants:EER89969ProteinID:EER89969ProteinID:EER89969.1InterPro:EF1B_G_CInterPro:EF1B_G_C_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003746GO:GO:0003824GO:GO:0004364GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006412GO:GO:0006414GO:GO:0006749GO:GO:0008135GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0019538InterPro:GST_CInterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR001662InterPro:IPR004045InterPro:IPR010987InterPro:IPR036433
PFAM:PF00043PFAM:PF00647PFAM:PF02798PFscan:PS50040PFscan:PS50404PFscan:PS50405
PANTHER:PTHR44372PANTHER:PTHR44372:SF2SMART:SM01183EnsemblPlantsGene:SORBI_3010G173100SUPFAM:SSF47616SUPFAM:SSF52833
SUPFAM:SSF89942unigene:Sbi.14154InterPro:Thioredoxin-like_sfUniParc:UPI0001A898B9RefSeq:XP_002438602.1SEG:seg
Description
hypothetical protein
Coordinates
chr10:-:50836164..50840275
Molecular Weight (calculated)
47092.5 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.358
Length
417 amino acids
Sequence
(BLAST)
001: MALVLHSGAG NKNAFKALIA AEYSGVKVEL TKDFEMGVSN KTPEFLKMNP LGKVPVLETP DGAVFESNAI ARYVARLKDD NPLFGSSRIE QAHVEQWVDF
101: AATEVDPGVA WYLYPRLGFI PYAHTTEETA IASLKRSLGA LNTHLASNTY LVGHSVTLAD IVLTCNLYHG IARILTKSFT SDFPHVERYF WTMVNQPNFK
201: KVIGEVKQAE SVPPVQKKAA PPKEPKAKDV KKEAPKEAPK PKVVEAPAEE EAPKPKPKNP LDLLPPSKMV LDDWKRLYSN TKTNFREVAI KGFWDMYDPE
301: GYSLWFCDYK YNDENTVSFV TLNKVGGFLQ RMDLARKYAF GKMLVIGSEA PFKLKGLWLF RGQEVPKFVM DEVYDMELYE WTKVDISDEA QKERVNAMIE
401: DQEPFEGEAL LDAKCFK
Best Arabidopsis Sequence Match ( AT1G09640.1 )
(BLAST)
001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK
Arabidopsis Description
Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.