CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016358_P006	Maize	cytosol	92.34	91.04
Os02t0220600-02	Rice	extracellular, plasma membrane	88.76	88.76
Os02t0220500-01	Rice	plasma membrane	87.08	87.92
Zm00001d053576_P001	Maize	endoplasmic reticulum	91.15	87.19
EER89969	Sorghum	cytosol	84.45	84.65
GSMUA_Achr9P11470_001	Banana	cytosol	76.08	82.81
GSMUA_Achr9P25030_001	Banana	cytosol	72.25	82.51
TraesCS6B01G215000.1	Wheat	cytosol	79.9	78.96
VIT_18s0041g01900.t01	Wine grape	cytosol	79.9	78.77
TraesCS6A01G186000.1	Wheat	cytosol	79.43	78.49
KRH01866	Soybean	nucleus	77.51	77.14
AT1G57720.1	Thale cress	cytosol	76.08	77.0
AT1G09640.1	Thale cress	cytosol	76.08	76.81
VIT_12s0035g01130.t01	Wine grape	cytosol	79.43	76.67
Solyc11g028100.1.1	Tomato	cytosol, unclear	75.6	76.33
KRH26289	Soybean	nucleus	76.32	76.32
Bra031676.1-P	Field mustard	cytosol	75.36	76.27
PGSC0003DMT400065617	Potato	cytosol	75.12	75.85
Bra020005.1-P	Field mustard	cytosol	74.88	75.79
KRH06050	Soybean	endoplasmic reticulum	75.84	75.66
PGSC0003DMT400040683	Potato	cytosol	74.64	75.54
Solyc06g011280.2.1	Tomato	extracellular	74.16	75.06
KRH51299	Soybean	cytosol, endoplasmic reticulum, nucleus	75.36	75.0
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	15.55	59.09
Bra030790.1-P	Field mustard	cytosol	72.49	53.53
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	45.45	50.67
CDY04368	Canola	cytosol	25.6	40.68

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.30.70.1010	Gene3D:3.40.30.10	EntrezGene:8085532	UniProt:C5XY44
EnsemblPlants:EES04758	ProteinID:EES04758	ProteinID:EES04758.1	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006412	GO:GO:0006414	GO:GO:0006749	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR001662	InterPro:IPR004045	InterPro:IPR010987	InterPro:IPR036433
PFAM:PF00043	PFAM:PF00647	PFAM:PF02798	PFscan:PS50040	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SMART:SM01183	EnsemblPlantsGene:SORBI_3004G094200	SUPFAM:SSF47616	SUPFAM:SSF52833
SUPFAM:SSF89942	unigene:Sbi.18579	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A858A7	RefSeq:XP_002451782.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:8110229..8113807

Molecular Weight (calculated)

47361.9 Da

IEP (calculated)

6.691

GRAVY (calculated)

-0.376

Length

418 amino acids

Sequence
(BLAST)

001: MALVLHAGSA NKNAFKTLIA AEYSGVKVEL AKDFQMGVSN KTPEFLKMNP IGKVPVLETP DGPVFESNAI ARYVTRLKAD NPLYGSSLID YAHIEQWMDF
101: ATTEVDANTG KWLYPRMGFY PYAAVTEESA IAALKRAFGS LNTHLASNTF LVGHSVTLAD IVLTCNLYLG FSRILTKSFT SEFPHVERYF WTMVNQPNFK
201: KVIGDVKQAE AVPPVPKKAA PAKEQKPKEA KKEAQKEAPK PKVAEKPAEE EEAPKPKPKN PLDLLPPSKM ILDDWKRLYS NTKTNFREVA IKGFWDMYDP
301: EGYSLWFCDY KYNDENTVSF VTLNKVGGFL QRMDLCRKYA FGKMLVVGSE PPFKVKGLWL FRGSEIPKFV MDEVYDMELY EWTKVDLSDE AQKERVNAMI
401: EDQEPFEGEA LLDAKCFK

Best Arabidopsis Sequence Match ( AT1G57720.1 )
(BLAST)

001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK

Arabidopsis Description

Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.