Factsheet for Bra030790.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31074	Canola	cytosol	69.26	95.15
Bra031676.1-P	Field mustard	cytosol	63.25	86.68
Bra020005.1-P	Field mustard	cytosol	63.07	86.44
GSMUA_Achr8P15790_001	Banana	cytosol	6.71	86.36
AT1G09640.1	Thale cress	cytosol	61.13	83.57
Os02t0220500-01	Rice	plasma membrane	54.42	74.4
Os02t0220600-02	Rice	extracellular, plasma membrane	54.42	73.68
KRH01866	Soybean	nucleus	54.42	73.33
GSMUA_Achr9P25030_001	Banana	cytosol	47.0	72.68
GSMUA_Achr9P11470_001	Banana	cytosol	49.29	72.66
Os06t0571400-01	Rice	plasma membrane	53.36	72.6
GSMUA_Achr9P19980_001	Banana	cytosol	5.12	72.5
EES04758	Sorghum	plastid	53.53	72.49
KRH51299	Soybean	cytosol, endoplasmic reticulum, nucleus	53.53	72.14
EER89969	Sorghum	cytosol	53.0	71.94
Zm00001d046352_P001	Maize	plasma membrane	52.65	71.46
VIT_18s0041g01900.t01	Wine grape	cytosol	53.18	70.99
Zm00001d016358_P006	Maize	cytosol	53.0	70.75
Zm00001d036959_P003	Maize	cytosol	52.12	70.74
KRH06050	Soybean	endoplasmic reticulum	51.94	70.17
KRH26289	Soybean	nucleus	51.59	69.86
Solyc11g028100.1.1	Tomato	cytosol, unclear	50.71	69.32
Zm00001d053576_P001	Maize	endoplasmic reticulum	53.36	69.11
Solyc06g011280.2.1	Tomato	extracellular	50.35	69.01
PGSC0003DMT400040683	Potato	cytosol	50.35	69.01
PGSC0003DMT400065617	Potato	cytosol	50.18	68.6
VIT_12s0035g01130.t01	Wine grape	cytosol	52.3	68.36
TraesCS7A01G362900.1	Wheat	golgi	49.29	67.55
TraesCS7D01G360200.2	Wheat	nucleus, plastid	49.29	67.55
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	48.76	67.32
HORVU7Hr1G087050.1	Barley	cytosol	49.12	67.31
TraesCS6B01G215000.1	Wheat	cytosol	49.12	65.72
TraesCS6A01G186000.1	Wheat	cytosol	48.59	65.01
HORVU6Hr1G039770.1	Barley	cytosol	9.89	54.9
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	10.42	53.64
Solyc11g028090.1.1	Tomato	extracellular, plastid	16.96	47.52
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	29.15	44.0
VIT_12s0035g01120.t01	Wine grape	plastid	33.04	41.19
GSMUA_Achr8P15800_001	Banana	extracellular	4.77	39.71

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.30.70.1010	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra030790	EnsemblPlants:Bra030790.1
EnsemblPlants:Bra030790.1-P	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006412	GO:GO:0006414
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019538	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR001662	InterPro:IPR004045	InterPro:IPR010987	InterPro:IPR036433	UniProt:M4EPR9	PFAM:PF00043
PFAM:PF00647	PFAM:PF02798	PFscan:PS50040	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44372
PANTHER:PTHR44372:SF2	SMART:SM01183	SUPFAM:SSF47616	SUPFAM:SSF52833	SUPFAM:SSF89942	TMHMM:TMhelix
InterPro:Thioredoxin-like_sf	UniParc:UPI00025467BE	SEG:seg	:	:	:

Description

AT1G57720 (E=6e-190) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative

Coordinates

chrA08:-:20354247..20357693

Molecular Weight (calculated)

64239.0 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.326

Length

566 amino acids

Sequence
(BLAST)

001: MALVMHSYKG NKNSDKAFIA AEFAGVKIDM PSGFEMGVTN KTPEFLKINP LGKIPVLETP EGPIFESNAI ARYVSRLNGE NSLNGSSLIE YAHIEQWIDF
101: SSLEIYGNIF NWFVPRMGFM PYSVPGEEAA ISALKRGLEA LNTHLASNTY LVGHSVTLAD IITVCNLNLG FSTVLTKSFT SAFPHVERYF WTLINQPNFK
201: KVVGDVKQTE SVPAIKKAGQ PAKPKEQPKK KEAPAAEAPK VVEEEEAPKP KAKNPLDLLP PSPMVLDEWK RLYSNTKSNF REVAIKGFWD MYDPEGYSLW
301: FCDYKYNDEN MVSFVTLNKV GGFLQRMDLA RKYAFGKMLI CGSEGPFKVK GLWLFRGPEI PKFVMDEVYD MELYEWTKVD ISDEAQKERV SQMIEDAEPF
401: EAQALDPTLR TNKASSVETS RGRERERERD ITEKDERDLG EWSFMAARCI LLFDCSALRI RNKGYVFCSF VIRIETCRDR EDCIIYVSLS GDSKDASKGV
501: KAESHTASSK TGTKVILVLV GLVAVAMFSF FLYKLWQKKK RDEQYARLLK LFEEDDELEV ELGLRD

Best Arabidopsis Sequence Match ( AT1G09640.1 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.