Factsheet for Bra031676.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06365	Canola	cytosol	99.03	99.03
AT1G09640.1	Thale cress	cytosol	90.56	90.34
Bra020005.1-P	Field mustard	cytosol	87.41	87.41
GSMUA_Achr8P15790_001	Banana	cytosol	9.2	86.36
Os02t0220500-01	Rice	plasma membrane	77.48	77.29
Os02t0220600-02	Rice	extracellular, plasma membrane	77.48	76.56
EES04758	Sorghum	plastid	76.27	75.36
GSMUA_Achr9P25030_001	Banana	cytosol	66.34	74.86
KRH01866	Soybean	nucleus	75.79	74.52
GSMUA_Achr9P11470_001	Banana	cytosol	69.25	74.48
EER89969	Sorghum	cytosol	75.06	74.34
KRH26289	Soybean	nucleus	74.82	73.92
Zm00001d046352_P001	Maize	plasma membrane	74.33	73.62
Os06t0571400-01	Rice	plasma membrane	74.09	73.56
KRH06050	Soybean	endoplasmic reticulum	74.58	73.51
KRH51299	Soybean	cytosol, endoplasmic reticulum, nucleus	74.58	73.33
VIT_18s0041g01900.t01	Wine grape	cytosol	75.06	73.11
Zm00001d036959_P003	Maize	cytosol	73.61	72.9
PGSC0003DMT400040683	Potato	cytosol	72.64	72.64
GSMUA_Achr9P19980_001	Banana	cytosol	7.02	72.5
Solyc06g011280.2.1	Tomato	extracellular	72.4	72.4
PGSC0003DMT400065617	Potato	cytosol	72.4	72.22
Zm00001d016358_P006	Maize	cytosol	74.09	72.17
VIT_12s0035g01130.t01	Wine grape	cytosol	75.3	71.82
Solyc11g028100.1.1	Tomato	cytosol, unclear	71.91	71.74
Zm00001d053576_P001	Maize	endoplasmic reticulum	74.58	70.48
TraesCS7A01G362900.1	Wheat	golgi	69.98	69.98
TraesCS7D01G360200.2	Wheat	nucleus, plastid	69.98	69.98
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	69.25	69.76
HORVU7Hr1G087050.1	Barley	cytosol	69.01	69.01
TraesCS6B01G215000.1	Wheat	cytosol	70.46	68.79
TraesCS6A01G186000.1	Wheat	cytosol	69.98	68.32
Bra030790.1-P	Field mustard	cytosol	86.68	63.25
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	14.53	54.55
HORVU6Hr1G039770.1	Barley	cytosol	13.08	52.94
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	42.37	46.67
Solyc11g028090.1.1	Tomato	extracellular, plastid	22.76	46.53
VIT_12s0035g01120.t01	Wine grape	plastid	49.15	44.71
GSMUA_Achr8P15800_001	Banana	extracellular	6.3	38.24

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.30.70.1010	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra031676	EnsemblPlants:Bra031676.1
EnsemblPlants:Bra031676.1-P	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0005488	GO:GO:0005515	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR001662	InterPro:IPR004045	InterPro:IPR010987
InterPro:IPR036433	UniProt:M4ES98	PFAM:PF00043	PFAM:PF00647	PFAM:PF02798	PFscan:PS50040
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SMART:SM01183	SUPFAM:SSF47616
SUPFAM:SSF52833	SUPFAM:SSF89942	InterPro:Thioredoxin-like_sf	UniParc:UPI000254322D	SEG:seg	:

Description

AT1G09640 (E=9e-204) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative

Coordinates

chrA09:-:35285254..35287406

Molecular Weight (calculated)

46468.8 Da

IEP (calculated)

5.140

GRAVY (calculated)

-0.306

Length

413 amino acids

Sequence
(BLAST)

001: MALVLHTYKG NKNADKALIA AEYVGVKIDV PSDFAMGVTN KTPEFLKMNP MGKVPVLETP EGPVFESNAI ARYVSRLNGE NSLNGSSLIE YAHVEQWSDF
101: STLEIYGNIL KWFGPRMGFM PYSAPGEEAA ISALKRGLDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKSFT SAFPHVERYF WTVINQPNFK
201: KVVGDVKQTE AVPPIKKAGQ PAKPKEEPKK KAAPAAEAPK VVEEEEEAPK PKAKNPLDLL PPSPMVLDEW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYAFGKML ICGSEAPFKV EGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK

Best Arabidopsis Sequence Match ( AT1G09640.1 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.