Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G360200.2 | Wheat | nucleus, plastid | 98.06 | 98.06 |
| TraesCS7B01G266300.1 | Wheat | cytosol, golgi, plastid, unclear | 97.09 | 97.8 |
| TraesCS7A01G362900.1 | Wheat | golgi | 97.34 | 97.34 |
| Os06t0571400-01 | Rice | plasma membrane | 78.93 | 78.37 |
| EER89969 | Sorghum | cytosol | 78.69 | 77.94 |
| Zm00001d036959_P003 | Maize | cytosol | 78.21 | 77.46 |
| Zm00001d046352_P001 | Maize | plasma membrane | 77.48 | 76.74 |
| GSMUA_Achr9P11470_001 | Banana | cytosol | 69.98 | 75.26 |
| GSMUA_Achr9P25030_001 | Banana | cytosol | 65.38 | 73.77 |
| AT1G57720.1 | Thale cress | cytosol | 70.46 | 70.46 |
| AT1G09640.1 | Thale cress | cytosol | 69.73 | 69.57 |
| VIT_18s0041g01900.t01 | Wine grape | cytosol | 70.94 | 69.1 |
| Solyc11g028100.1.1 | Tomato | cytosol, unclear | 69.25 | 69.08 |
| Bra031676.1-P | Field mustard | cytosol | 69.01 | 69.01 |
| PGSC0003DMT400040683 | Potato | cytosol | 69.01 | 69.01 |
| Solyc06g011280.2.1 | Tomato | extracellular | 68.77 | 68.77 |
| PGSC0003DMT400065617 | Potato | cytosol | 68.28 | 68.12 |
| KRH01866 | Soybean | nucleus | 69.25 | 68.1 |
| Bra020005.1-P | Field mustard | cytosol | 68.04 | 68.04 |
| KRH51299 | Soybean | cytosol, endoplasmic reticulum, nucleus | 68.52 | 67.38 |
| KRH26289 | Soybean | nucleus | 68.04 | 67.22 |
| KRH06050 | Soybean | endoplasmic reticulum | 68.04 | 67.06 |
| VIT_12s0035g01130.t01 | Wine grape | cytosol | 69.98 | 66.74 |
| HORVU6Hr1G039770.1 | Barley | cytosol | 13.56 | 54.9 |
| GSMUA_Achr9P19970_001 | Banana | cytosol, mitochondrion | 14.04 | 52.73 |
| Bra030790.1-P | Field mustard | cytosol | 67.31 | 49.12 |
| GSMUA_Achr2P13820_001 | Banana | cytosol, endoplasmic reticulum, peroxisome, plastid | 40.68 | 44.8 |
| CDY04368 | Canola | cytosol | 24.46 | 38.4 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:17.5.1.2.2 | Gene3D:3.30.70.1010 | Gene3D:3.40.30.10 | InterPro:EF1B_G_C | InterPro:EF1B_G_C_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:GST_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N |
| EnsemblPlantsGene:HORVU7Hr1G087050 | EnsemblPlants:HORVU7Hr1G087050.1 | InterPro:IPR001662 | InterPro:IPR004045 | InterPro:IPR010987 | InterPro:IPR036433 |
| UniProt:M0WF40 | PFAM:PF00043 | PFAM:PF00647 | PFAM:PF02798 | PFscan:PS50040 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR44372 | PANTHER:PTHR44372:SF2 | SMART:SM01183 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| SUPFAM:SSF89942 | InterPro:Thioredoxin-like_sf | UniParc:UPI000224A830 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:524389993..524393327
Molecular Weight (calculated)
46806.3 Da
IEP (calculated)
6.532
GRAVY (calculated)
-0.325
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVLHSGSG NKNAFKALIA AEYCGVKVEL PKNFEMGVSN KTPEFIKMNP LGKVPVLETP DGAVFESNAI ARYVARSKGD NLLWGGSLIE YARVEQWMDF
101: AATEVDPNIA RWLYPRLGYA PFNAQSEEFG IAGLKRALEA LNTHLASNTF LVGHSVTLAD IVMTCNLYHG FARILTKTFT SEFPHVERYF WTMVNQPNFK
201: KVIGDFKQAE VVPSVQKKAA PAKPKEAKKE APKEAPKPAV VEAPEEEAPK PKPKNPLDLL PPSKMVLDDW KRLYSNTKSN FHDVAVKGFW EMYDPEGYSL
301: WFCDYKYQEE NTVSYVTLNK VGGFLQRMDL CRKYAFGKML VIGSEAPFKV KGLWLFRGQD IPEFVMNEVY DMELYEWTKV DLSDEAQKKR VEAMIEDLEP
401: FEGQSLLDAK CFK
101: AATEVDPNIA RWLYPRLGYA PFNAQSEEFG IAGLKRALEA LNTHLASNTF LVGHSVTLAD IVMTCNLYHG FARILTKTFT SEFPHVERYF WTMVNQPNFK
201: KVIGDFKQAE VVPSVQKKAA PAKPKEAKKE APKEAPKPAV VEAPEEEAPK PKPKNPLDLL PPSKMVLDDW KRLYSNTKSN FHDVAVKGFW EMYDPEGYSL
301: WFCDYKYQEE NTVSYVTLNK VGGFLQRMDL CRKYAFGKML VIGSEAPFKV KGLWLFRGQD IPEFVMNEVY DMELYEWTKV DLSDEAQKKR VEAMIEDLEP
401: FEGQSLLDAK CFK
001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK
Arabidopsis Description
Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.