Factsheet for GSMUA_Achr2P13820_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, endoplasmic reticulum, peroxisome, plastid

Predictor Summary:

cytosol 4
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 2
vacuole 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	15.73	53.64
GSMUA_Achr8P15800_001	Banana	extracellular	8.8	48.53
Os02t0220500-01	Rice	plasma membrane	52.0	47.1
GSMUA_Achr9P25030_001	Banana	cytosol	45.87	46.99
Os02t0220600-02	Rice	extracellular, plasma membrane	50.93	45.69
GSMUA_Achr9P11470_001	Banana	cytosol	46.67	45.57
EES04758	Sorghum	plastid	50.67	45.45
Zm00001d016358_P006	Maize	cytosol	49.6	43.87
VIT_18s0041g01900.t01	Wine grape	cytosol	49.6	43.87
EER89969	Sorghum	cytosol	48.53	43.65
Zm00001d046352_P001	Maize	plasma membrane	48.27	43.41
AT1G57720.1	Thale cress	cytosol	47.73	43.34
Zm00001d053576_P001	Maize	endoplasmic reticulum	50.4	43.25
AT1G09640.1	Thale cress	cytosol	47.73	43.24
Zm00001d036959_P003	Maize	cytosol	48.0	43.17
PGSC0003DMT400065617	Potato	cytosol	47.47	43.0
Bra020005.1-P	Field mustard	cytosol	47.2	42.86
VIT_12s0035g01130.t01	Wine grape	cytosol	49.07	42.49
PGSC0003DMT400040683	Potato	cytosol	46.67	42.37
Bra031676.1-P	Field mustard	cytosol	46.67	42.37
Solyc06g011280.2.1	Tomato	extracellular	46.4	42.13
Os06t0571400-01	Rice	plasma membrane	46.67	42.07
Solyc11g028100.1.1	Tomato	cytosol, unclear	46.4	42.03
TraesCS6B01G215000.1	Wheat	cytosol	47.2	41.84
TraesCS6A01G186000.1	Wheat	cytosol	46.67	41.37
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	45.07	41.22
TraesCS7D01G360200.2	Wheat	nucleus, plastid	45.07	40.92
HORVU7Hr1G087050.1	Barley	cytosol	44.8	40.68
TraesCS7A01G362900.1	Wheat	golgi	44.53	40.44
Bra030790.1-P	Field mustard	cytosol	44.0	29.15
GSMUA_Achr9P19980_001	Banana	cytosol	0.53	5.0
GSMUA_Achr8P15790_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.40.30.10	InterPro:EF1B_G_C_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006412
GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr2G13820_001	EnsemblPlants:GSMUA_Achr2P13820_001	EnsemblPlants:GSMUA_Achr2T13820_001
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
InterPro:IPR036433	UniProt:M0S7S3	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SUPFAM:SSF47616	SUPFAM:SSF52833	SUPFAM:SSF89942	TMHMM:TMhelix
InterPro:Thioredoxin-like_sf	UniParc:UPI000296C0CE	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G13820_001]

Coordinates

chr2:-:15811126..15812836

Molecular Weight (calculated)

42176.4 Da

IEP (calculated)

5.261

GRAVY (calculated)

-0.033

Length

375 amino acids

Sequence
(BLAST)

001: MDHKHSRFSS SQSAPPFSHS AKPLSSTVPE NDEATVCSFS HSVDPMDVPP LPFFFGATYC SSRSYIRAYG REWPLALSGF FFLLFLLFLV RIYIYVFFDV
101: VFVLDPEPSS CMALVLHATR TNKNGIKALI AAEYSGVEIE MAKNFQMGVS NTTPEFLKMN PIGKVPLLET PDGPIFESNA IARYVARLKA DNPLYGSSLF
201: EYALIEQWID FASTEIDPNI AQWFYPRHGL KPYFAAAEEA AVRALKRALR ALNTHLASKT YLVGHSVTLA DIIMACNLYL GFLCIMTKSF TAEFPHVERY
301: YWTMVNLPNF RKVLGEVKQA DAVPPKVEEL EQGNKLYQWT KVDISDEGNR ESVNAMIGEE DAFEGEALPD AKCFE

Best Arabidopsis Sequence Match ( AT1G09640.2 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVKGLWLFRG PEIPKFIMDE VYDMELYEWT KVDISDEAQK ERVSQMIEDA EPFEGEALLD AKCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.