Factsheet for GSMUA_Achr8P15790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19980_001	Banana	cytosol	59.09	65.0
GSMUA_Achr9P25030_001	Banana	cytosol	88.64	10.66
GSMUA_Achr9P11470_001	Banana	cytosol	88.64	10.16
KRH26289	Soybean	nucleus	88.64	9.33
KRH51299	Soybean	cytosol, endoplasmic reticulum, nucleus	88.64	9.29
KRH01866	Soybean	nucleus	88.64	9.29
Bra020005.1-P	Field mustard	cytosol	86.36	9.2
Bra031676.1-P	Field mustard	cytosol	86.36	9.2
KRH06050	Soybean	endoplasmic reticulum	86.36	9.07
AT1G57720.1	Thale cress	cytosol	84.09	8.96
AT1G09640.1	Thale cress	cytosol	84.09	8.94
VIT_12s0035g01120.t01	Wine grape	plastid	88.64	8.59
CDY04368	Canola	cytosol	47.73	7.98
Bra030790.1-P	Field mustard	cytosol	86.36	6.71
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	4.55	1.82
GSMUA_Achr8P15800_001	Banana	extracellular	0.0	0.0
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:3.30.70.1010	MapMan:35.1	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G15790_001
EnsemblPlants:GSMUA_Achr8P15790_001	EnsemblPlants:GSMUA_Achr8T15790_001	InterPro:IPR001662	InterPro:IPR036433	UniProt:M0TQT2	PFAM:PF00647
PFscan:PS50040	PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SMART:SM01183	SUPFAM:SSF89942	UniParc:UPI000296C202

Description

Elongation factor 1-gamma 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15790_001]

Coordinates

chr8:-:13591400..13592914

Molecular Weight (calculated)

5419.4 Da

IEP (calculated)

4.429

GRAVY (calculated)

-0.420

Length

44 amino acids

Sequence
(BLAST)

1: MILDEWKRLY SNTKANFCEL AIKGFWDMYD PEGYSLWFCD YKVQ

Best Arabidopsis Sequence Match ( AT1G57720.1 )
(BLAST)

001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK

Arabidopsis Description

Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.