Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P19970_001 | Banana | cytosol, mitochondrion | 33.82 | 20.91 |
| GSMUA_Achr9P11470_001 | Banana | cytosol | 55.88 | 9.9 |
| GSMUA_Achr9P25030_001 | Banana | cytosol | 51.47 | 9.56 |
| CDY04368 | Canola | cytosol | 36.76 | 9.51 |
| GSMUA_Achr2P13820_001 | Banana | cytosol, endoplasmic reticulum, peroxisome, plastid | 48.53 | 8.8 |
| AT1G57720.1 | Thale cress | cytosol | 45.59 | 7.51 |
| AT1G09640.1 | Thale cress | cytosol | 45.59 | 7.49 |
| KRH01866 | Soybean | nucleus | 45.59 | 7.38 |
| KRH51299 | Soybean | cytosol, endoplasmic reticulum, nucleus | 45.59 | 7.38 |
| KRH26289 | Soybean | nucleus | 44.12 | 7.18 |
| KRH06050 | Soybean | endoplasmic reticulum | 42.65 | 6.92 |
| Bra031676.1-P | Field mustard | cytosol | 38.24 | 6.3 |
| Bra020005.1-P | Field mustard | cytosol | 35.29 | 5.81 |
| Bra030790.1-P | Field mustard | cytosol | 39.71 | 4.77 |
| GSMUA_Achr9P19980_001 | Banana | cytosol | 1.47 | 2.5 |
| VIT_12s0035g01120.t01 | Wine grape | plastid | 11.76 | 1.76 |
| GSMUA_Achr8P15790_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P15800_001 | EnsemblPlants:GSMUA_Achr8T15800_001 | EnsemblPlantsGene:GSMUA_Achr8G15800_001 | PANTHER:PTHR44372 | PANTHER:PTHR44372:SF2 | UniParc:UPI000295A104 |
| UniProt:M0TQT3 | MapMan:35.2 | : | : | : | : |
Description
Elongation factor 1-gamma 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15800_001]
Coordinates
chr8:-:13592945..13593813
Molecular Weight (calculated)
7753.2 Da
IEP (calculated)
6.222
GRAVY (calculated)
-0.156
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MPLKSANFHL TNNKGDVYFF ALLVSSVTHL KADNPLYGSS RMDYAHIEQI IDFASMEVDA NTSRWLYP
001: MWFHFTVLKI VKDFKEVGGS YDRGASMPHM DARGLPATAR GRRLSSSSGV FYYFALLISS SRVQERNQRI HSSSQKTSLT IVKEIKVILK ARLDPLARAQ
101: RLARPGSSVL STWFRLFG
101: RLARPGSSVL STWFRLFG
Arabidopsis Description
Reverse transcriptase family protein [Source:UniProtKB/TrEMBL;Acc:F4IWK7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.