Factsheet for GSMUA_Achr9P19980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15790_001	Banana	cytosol	65.0	59.09
GSMUA_Achr9P25030_001	Banana	cytosol	72.5	7.92
GSMUA_Achr9P11470_001	Banana	cytosol	72.5	7.55
KRH26289	Soybean	nucleus	75.0	7.18
KRH51299	Soybean	cytosol, endoplasmic reticulum, nucleus	75.0	7.14
KRH01866	Soybean	nucleus	75.0	7.14
Bra020005.1-P	Field mustard	cytosol	72.5	7.02
Bra031676.1-P	Field mustard	cytosol	72.5	7.02
KRH06050	Soybean	endoplasmic reticulum	72.5	6.92
CDY04368	Canola	cytosol	45.0	6.84
AT1G57720.1	Thale cress	cytosol	70.0	6.78
AT1G09640.1	Thale cress	cytosol	70.0	6.76
VIT_12s0035g01120.t01	Wine grape	plastid	72.5	6.39
Bra030790.1-P	Field mustard	cytosol	72.5	5.12
GSMUA_Achr8P15800_001	Banana	extracellular	2.5	1.47
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	5.0	0.53
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.30.70.1010	MapMan:35.2	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G19980_001
EnsemblPlants:GSMUA_Achr9P19980_001	EnsemblPlants:GSMUA_Achr9T19980_001	InterPro:IPR001662	InterPro:IPR036433	UniProt:M0U1V7	PFAM:PF00647
PFscan:PS50040	PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SUPFAM:SSF89942	UniParc:UPI0002957974	:

Description

Elongation factor 1-gamma 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19980_001]

Coordinates

chr9:+:22769847..22770718

Molecular Weight (calculated)

4793.9 Da

IEP (calculated)

9.098

GRAVY (calculated)

-0.125

Length

40 amino acids

Sequence
(BLAST)

1: MILDEWKRLY SNTKMNFGEV AIKGFWDMYD RPRGVLTVVL

Best Arabidopsis Sequence Match ( AT1G09640.1 )
(BLAST)

001: MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
101: SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
201: KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
301: LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
401: PFEGEALLDA KCFK

Arabidopsis Description

Probable elongation factor 1-gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O04487]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.