Factsheet for GSMUA_Achr9P25030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15790_001	Banana	cytosol	10.66	88.64
GSMUA_Achr9P11470_001	Banana	cytosol	89.62	85.42
Os02t0220500-01	Rice	plasma membrane	82.51	72.95
GSMUA_Achr9P19980_001	Banana	cytosol	7.92	72.5
EES04758	Sorghum	plastid	82.51	72.25
Os02t0220600-02	Rice	extracellular, plasma membrane	81.97	71.77
VIT_18s0041g01900.t01	Wine grape	cytosol	80.6	69.58
EER89969	Sorghum	cytosol	79.23	69.54
Zm00001d016358_P006	Maize	cytosol	80.33	69.34
Zm00001d046352_P001	Maize	plasma membrane	78.96	69.3
Os06t0571400-01	Rice	plasma membrane	78.69	69.23
Zm00001d036959_P003	Maize	cytosol	78.69	69.06
VIT_12s0035g01130.t01	Wine grape	cytosol	81.15	68.59
Zm00001d053576_P001	Maize	endoplasmic reticulum	81.42	68.19
TraesCS6B01G215000.1	Wheat	cytosol	78.14	67.61
TraesCS6A01G186000.1	Wheat	cytosol	77.05	66.67
AT1G57720.1	Thale cress	cytosol	75.14	66.59
AT1G09640.1	Thale cress	cytosol	75.14	66.43
Bra020005.1-P	Field mustard	cytosol	74.86	66.34
Bra031676.1-P	Field mustard	cytosol	74.86	66.34
TraesCS7D01G360200.2	Wheat	nucleus, plastid	74.86	66.34
TraesCS7B01G266300.1	Wheat	cytosol, golgi, plastid, unclear	74.32	66.34
TraesCS7A01G362900.1	Wheat	golgi	74.59	66.1
PGSC0003DMT400040683	Potato	cytosol	74.59	66.1
PGSC0003DMT400065617	Potato	cytosol	74.59	65.94
Solyc06g011280.2.1	Tomato	extracellular	74.04	65.62
Solyc11g028100.1.1	Tomato	cytosol, unclear	74.04	65.46
HORVU7Hr1G087050.1	Barley	cytosol	73.77	65.38
GSMUA_Achr9P19970_001	Banana	cytosol, mitochondrion	19.13	63.64
GSMUA_Achr8P15800_001	Banana	extracellular	9.56	51.47
Bra030790.1-P	Field mustard	cytosol	72.68	47.0
GSMUA_Achr2P13820_001	Banana	cytosol, endoplasmic reticulum, peroxisome, plastid	46.99	45.87

Protein Annotations

Gene3D:1.20.1050.10	MapMan:17.5.1.2.2	Gene3D:3.30.70.1010	Gene3D:3.40.30.10	InterPro:EF1B_G_C	InterPro:EF1B_G_C_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0005488	GO:GO:0005515
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G25030_001	EnsemblPlants:GSMUA_Achr9P25030_001	EnsemblPlants:GSMUA_Achr9T25030_001	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR001662	InterPro:IPR004045	InterPro:IPR010987
InterPro:IPR036433	UniProt:M0U3B0	PFAM:PF00043	PFAM:PF00647	PFAM:PF02798	PFscan:PS50040
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44372	PANTHER:PTHR44372:SF2	SMART:SM01183	SUPFAM:SSF47616
SUPFAM:SSF52833	SUPFAM:SSF89942	InterPro:Thioredoxin-like_sf	UniParc:UPI000295349A	SEG:seg	:

Description

Elongation factor 1-gamma 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G25030_001]

Coordinates

chr9:-:29659674..29663125

Molecular Weight (calculated)

41949.5 Da

IEP (calculated)

5.103

GRAVY (calculated)

-0.369

Length

366 amino acids

Sequence
(BLAST)

001: MGVSNKTPEF LKMNPIGKVP VLETPDGPVF ESNAIARYVT RLKADNPLYG CSLIEYAHIE QWIDYASMEI DANLARWLYP RLGYMPYLAV AEEAAISSLK
101: RALGALNTHL ASSTYLVGHS VTLADIVMTC NLYLGFSMIL VKSFTSEFPH VERYFWTMVN QPNFHKVVGE VKQVDSVPPV PSQKKPVQPK EPAKPKEVKK
201: EPKKEPAKPN VQEVLEEEEE APKPKPKNPL DLLPPSKMIL DEWKRLYSNT KTNFREVAIK GFWDMYDPEG YSLWFCDYKY NDENTVSFVT LNKVSGFLQR
301: MDLTRKYAFG KMLIPKFVLD EVYDMELYDW AKVDISDEAQ KELVNAMIED QEPFEGEALL DAKCFK

Best Arabidopsis Sequence Match ( AT1G57720.1 )
(BLAST)

001: MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF
101: SSLEIDANML KWFAPRMGYA PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT SAFPHVERYF WTMVNQPEFK
201: KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL
301: WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP
401: FEGEALLDAK CFK

Arabidopsis Description

Probable elongation factor 1-gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.