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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G073700.1 Barley cytosol 1.23 100.0
HORVU5Hr1G058160.6 Barley cytosol 97.24 98.53
TraesCS7A01G129700.1 Wheat nucleus 98.89 98.43
TraesCS7D01G128800.1 Wheat cytosol, plastid 98.85 98.39
TraesCS7B01G029700.1 Wheat plastid 98.85 98.27
Os06t0167000-02 Rice cytosol, nucleus, plastid 47.0 97.79
Zm00001d045199_P004 Maize cytosol 96.26 95.77
OQU75900 Sorghum cytosol 96.26 95.77
Zm00001d036301_P007 Maize plastid 96.0 95.39
VIT_09s0002g07070.t01 Wine grape cytosol 92.34 92.5
KRH09717 Soybean nucleus 91.92 91.65
KRH23587 Soybean nucleus 91.79 91.52
Solyc07g008880.2.1 Tomato plastid 91.96 90.69
PGSC0003DMT400073947 Potato cytosol 91.88 90.41
GSMUA_AchrUn_... Banana nucleus 16.42 88.94
Os05t0163250-01 Rice cytosol 20.84 87.81
Solyc06g043160.1.1 Tomato cytosol 1.62 73.08
CDY57684 Canola cytosol 1.06 47.17
Bra003548.1-P Field mustard cytosol 1.06 47.17
HORVU7Hr1G051980.3 Barley cytosol, mitochondrion, nucleus 3.11 47.1
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10Gene3D:3.90.1570.40
UniProt:A0A287VSV1ncoils:CoilGO:GO:0000398GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0017070
GO:GO:0030623EnsemblPlantsGene:HORVU7Hr1G027000EnsemblPlants:HORVU7Hr1G027000.2InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPN
PFAM:PD149576PFAM:PF01398PFAM:PF08082PFAM:PF08083PFAM:PF08084PFAM:PF10596
PFAM:PF10597PFAM:PF10598PFAM:PF12134InterPro:PRO8NTInterPro:PROCNInterPro:PROCT
InterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249PANTHER:PTHR11140InterPro:Prp8_U5-snRNA-bdInterPro:Prp8_U6-snRNA-bd
InterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232SUPFAM:SSF53098UniParc:UPI000B47061CSEG:seg
Description
No Description!
Coordinates
chrchr7H:-:47582637..47592053
Molecular Weight (calculated)
272251.0 Da
IEP (calculated)
9.004
GRAVY (calculated)
-0.471
Length
2351 amino acids
Sequence
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XPAAAPPPQA GQPLTPAELE AQLVEKARKW HQLNSKRYGD KRKFGFVEAQ KEDMPPEHVR KIIRDHGDMS SKKYRHDKRV
0101: YLGALKFVPH AVYKLLENMP MPWEQVRDVK ILYHITGAIT FVNEIPWVVE PIYLAQWGSM WIMMRREKRD RRHFKRMRFP PFDDEEPPLD YADNLLDVEP
0201: LEAIQLELDP EEDGAVYNWF YDHNPLVKTN FINGPSYRKW NLSLPIMATL YRLAGQLLSD LTDRNYFYLF DMESFFTAKA LNMCIPGGPK FEPLYRDMEK
0301: GDEDWNEFND INKLIIRQPL RTEYRIAFPH LYNNRPRKVR LCIYHTPMIM YIKTEDPDLP AFYYDPLINP ITSTSKVDRR EKKASEEDDE DDFSLPEGVE
0401: PLLNQTPLYT DTTAAGISLL FAPRPFNMRS GRTRRAEDIP LVSEWFKEHC PPAYPVKVRV SYQKLLKCYV LNELHHRPPK AQKKKHLFRS LQATKFFQST
0501: ELDWAEAGLQ VCKQGYNMLN LLIHRKNLNY LHLDYNFNLK PVKTLTTKER KKSRFGNAFH LCREILRLTK LVVDANIQFR LGNVDAFQLA DGLQYIFSHV
0601: GQLTGMYRYK YRLMRQIRMC KDLKHLIYYR FNTGPVGKGP GCGFWAPMWR VWLFFLRGIV PLLERWLGNL LARQFEGRHS KGVAKTVTKQ RVESHFDLEL
0701: RAAVMHDVLD AMPEGIKQNK ARTILQHLSE AWRCWKANIP WKVPGLPVPI ENMILRYVKS KADWWTNVAH YNRERIRRGA TVDKTVCRKN LGRLTRLWLK
0801: AEQERQHNYL KDGPYVTPEE AVAIYTTTVH WLESRKFSPI PFPPLSYKHD TKLLILALER LKESYSVAVR LNQLQREELG LIEQAYDNPH EALSRIKRHL
0901: LTQRAFKEVG IEFMDLYSYL IPVYEIEPLE KITDAYLDQY LWYEGDKRHL FPNWVKPADS EPPPLLVYKW CQGINNLQDI WDTSDGQCVV MLQTKFEKFF
1001: EKIDLTLLNR LLRLVLDHNI ADYVTAKNNV VLSYKDMSHT NSYGLIRGLQ FASFIVQYYG LVLDLLLLGL TRASEIAGPP QMPNEFLTYT DTKVETRHPI
1101: RLYSRYIDKV HIMFRFTHEE ARDLIQRYLT EHPDPNNENM VGYNNKKCWP RDARMRLMKH DVNLGRSVFW DMKNRLPRSI TTLEWENGFV SVYSKDNPNL
1201: LFSMSGFEVR ILPKIRMTQE AFSNTKDGVW NLQNEQTKER TAIAFLRVDD EHMKVFENRV RQILMSSGST TFTKIVNKWN TALIGLMTYF REATVHTQEL
1301: LDLLVKCENK IQTRIKIGLN SKMPSRFPPV IFYTPKEIGG LGMLSMGHIL IPQSDLRYSK QTDVGVTHFR SGMSHEEDQL IPNLYRYIQP WESEFIDSQR
1401: VWAEYALKRQ EAQSQNRRLT LEDLEDSWDR GIPRINTLFQ KDRHTLAYDK GWRVRTDFKQ YQVLKQNPFW WTHQRHDGKL WNLNNYRTDV IQALGGVEGI
1501: LEHTLFKGTY FPTWEGLFWE KASGFEESMK YKKLTNAQRS GLNQIPNRRF TLWWSPTINR ANVYVGFQVQ LDLTGIFMHG KIPTLKISLI QIFRAHLWQK
1601: VHESVVMDLC QVLDQELDAL EIETVQKETI HPRKSYKMNS SCADVLLFAA HRWQMSKPSL VSESKDVFDQ KASNKYWIDV QLRWGDYDSH DIERYTRAKF
1701: MDYTTDNMSI YPSPTGVMIG LDLAYNLHSA FGNWFPGSKP LLQQAMNKIM KSNPALYVLR ERIRKGLQLY SSEPTEPYLS SQNYGEIFSN QIIWFVDDTN
1801: VYRVTIHKTF EGNLTTKPIN GAIFIFNPRT GQLFLKVIHT SVWAGQKRLG QLAKWKTAEE VAALVRSLPV EEQPKQIIVT RKGMLDPLEV HLLDFPNIVI
1901: KGSELQLPFQ ACLKIEKFGD LILKATEPQM VLYNIYDDWL KSISSYTAFS RLVLILRALH VNNEKAKMLL KPDKTIVTEP HHIWPSLTDE QWLKVECALR
2001: DLILSDYAKK NNVNTSALTQ SEIRDIILGA EIAPPSQQRQ QIAEIEKQSR ETNQVTAQTT RTVNVHGDEL IVTTTSPYEQ AAFASKTDWR VRAISATNLY
2101: LRVNHIYVNS DDIKETGYTY IMPKNILKKF ICIADLRTQV AGFLYGLSPQ DNPQVKEIRC ISIPPQHGTH QMVTLPANLP EHEFLADLEP LGWMHTQPNE
2201: APQLSPQDLT SHAKILENNK QWDGEKCIIL TCSFTPGSCS LTAYKLTPSG YEWARGNKDN GSNPQGYLPT HYEKVQMLLS DRFLGFYMVP DNAPWNYNFM
2301: GVKHDPLMKY SMKLGTPRDF YHEDHRPTHF LEFSNIEEGE VAEGDREDTF S
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.