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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g008880.2.1 Tomato plastid 98.28 98.49
VIT_09s0002g07070.t01 Wine grape cytosol 94.27 95.95
KRH09717 Soybean nucleus 93.68 94.91
KRH23587 Soybean nucleus 93.6 94.83
AT1G80070.1 Thale cress cytosol 92.88 94.07
HORVU5Hr1G058160.6 Barley cytosol 90.37 93.06
TraesCS5A01G189600.1 Wheat unclear 90.79 91.95
HORVU7Hr1G027000.2 Barley cytosol 90.41 91.88
TraesCS5B01G193600.1 Wheat golgi 90.67 91.86
TraesCS5D01G201300.1 Wheat cytosol 90.62 91.82
Zm00001d045199_P004 Maize cytosol 90.71 91.71
OQU75900 Sorghum cytosol 90.67 91.66
TraesCS7A01G129700.1 Wheat nucleus 90.58 91.62
Os06t0167000-02 Rice cytosol, nucleus, plastid 43.32 91.59
TraesCS7D01G128800.1 Wheat cytosol, plastid 90.54 91.57
TraesCS7B01G029700.1 Wheat plastid 90.62 91.54
Zm00001d036301_P007 Maize plastid 90.58 91.46
AT4G38780.1 Thale cress cytosol 88.36 90.52
GSMUA_AchrUn_... Banana nucleus 16.16 88.94
CDY65286 Canola nucleus 6.78 85.71
Os05t0163250-01 Rice cytosol 19.88 85.13
CDY66547 Canola cytosol 12.81 81.38
TraesCS3D01G428800.1 Wheat cytosol, mitochondrion 2.64 57.8
TraesCS1B01G416400.1 Wheat mitochondrion 2.47 55.14
TraesCS1B01G415700.1 Wheat mitochondrion 2.64 54.31
TraesCS1B01G368800.1 Wheat mitochondrion 2.47 54.13
Bra003548.1-P Field mustard cytosol 1.17 52.83
HORVU7Hr1G051980.3 Barley cytosol, mitochondrion, nucleus 2.68 41.29
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40EntrezGene:102586113MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10
Gene3D:3.90.1570.40ncoils:CoilGO:GO:0000398GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0017070
GO:GO:0030623InterPro:IPR037518InterPro:JAMM/MPN+_domUniProt:M1CSW4InterPro:MPNPFAM:PD149576
PFAM:PF01398PFAM:PF08082PFAM:PF08083PFAM:PF08084PFAM:PF10596PFAM:PF10597
PFAM:PF10598PFAM:PF12134EnsemblPlantsGene:PGSC0003DMG400028736PGSC:PGSC0003DMG400028736EnsemblPlants:PGSC0003DMT400073947InterPro:PRO8NT
InterPro:PROCNInterPro:PROCTInterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249PANTHER:PTHR11140
InterPro:Prp8_U5-snRNA-bdInterPro:Prp8_U6-snRNA-bdInterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232SUPFAM:SSF53098
UniParc:UPI000296F431RefSeq:XP_006361638.1SEG:seg:::
Description
PRP8 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028736]
Coordinates
chr7:+:6514084..6527705
Molecular Weight (calculated)
277977.0 Da
IEP (calculated)
9.059
GRAVY (calculated)
-0.475
Length
2389 amino acids
Sequence
(BLAST)
0001: MWSGNGQDMW NNSNIAPPGT SGGPPPPPSM MQPPPPPSSM MPPPPGTSSG HSMMPPGTSG GGASGAGPPL PPPSYTVLPT EAQLEEKARK WMQLNSKRYS
0101: DKRKFGFVET QKEDMPPEHV RKIIRDHGDM SSKKYRHDKR VYLGALKFVP HAVYKLLENM PMPWEQVRDV KILYHITGAI TFVNEIPWVV EPIYLAQWGT
0201: MWIMMRREKR DRRHFKRMRF PPFDDEEPPL DYADNLLDVD PLEPIQLELD EEEDSAVYNW FYDHKPLVKT KLINGPSYRR WHLSLPIMAT LHRLAGQLLS
0301: DLTDRNYFYL FDMESFFTAK ALNMCIPGGP KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV RLGIYHTPMI MYIKTEDPDL
0401: PAFYYDPLIH PIVTKDRREK KVSDDDNDDD FALPEGVEPL LTETPIYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SDWFKEHCPP SYPVKVRVSY
0501: QKLLKCFVLN ELHHRPPKAQ KKKHLFRSLQ ATKFFQTTEL DWAEAGLQVC KQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC
0601: REILRLTKLV VDANVQFRLG NVDAFQLADG LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL
0701: LERWLGNLLA RQFEGRHSKG VAKTVTKQRV ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA
0801: DWWTNVAHYN RERIRRGATV DKTVCRKNLG RLTRLWLKAE QERQHNYLKD GPYVTPEEAV AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK
0901: ESYSVAVRLN QQQREELGLI EQAYDNPHEA LSRIKRHLLT QRAFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP
1001: PPLLVYKWCQ GINNLQGVWD TSEGQCVVML QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVTAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQYYGLV
1101: LDLLLLGLTR ASEIAGPPQM PNEFITYSDS RVETRHPIRL YSRYIDKVHI LFRFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV
1201: NLGRSVFWDM KNRLPRSITT LEWENSFVSV YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTRDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ
1301: ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSQQT
1401: DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ
1501: VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN
1601: VYVGFQVQLD LTGIFMHGKI PTLKISLIQI FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADILLFAAHR WPMSKPSLVA
1701: ESKDVFDQKA SNKYWIDVQL RWGDYDSHDI ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER
1801: IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA
1901: ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN
2001: NEKAKMLLKP DKSVITEPHH IWPSLTDDQW MKVEVALRDL ILSDYAKKNN VNTSALTVSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTKT
2101: TNVHGDELIV TTTSPYEQAA FGSKTDWRVR AISATNLYLR VNHIYVNSED IKETGYTYIM PKNILKKFIC IADLRTQIAG YLYGVSPPDN PQVKEIRCIA
2201: MPPQWGTHQQ VHLPSGLPEH DFLTDLEPLG WMHTQPNELP QLSPQDVTSH ARVLENNKHW DGEKCIILTC SFTPGSCSLT AYKLTPTGYE WGRANKDTGS
2301: NPHGYLPTHY EKVQMLLSDR FLGFYMIPDN GPWNYNFMGV KHTVSMKYGV KLGTPREYYN EDHRPTHFLE FSNMEEGDTA EADREDTFT
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.