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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0167000-02 Rice cytosol, nucleus, plastid 47.23 98.76
Zm00001d036301_P007 Maize plastid 98.31 98.18
HORVU5Hr1G058160.6 Barley cytosol 95.94 97.72
TraesCS5A01G189600.1 Wheat unclear 96.53 96.69
TraesCS5D01G201300.1 Wheat cytosol 96.49 96.69
TraesCS5B01G193600.1 Wheat golgi 96.45 96.65
TraesCS7A01G129700.1 Wheat nucleus 96.49 96.53
TraesCS7D01G128800.1 Wheat cytosol, plastid 96.32 96.36
TraesCS7B01G029700.1 Wheat plastid 96.36 96.28
HORVU7Hr1G027000.2 Barley cytosol 95.77 96.26
VIT_09s0002g07070.t01 Wine grape cytosol 92.72 93.35
Os05t0163250-01 Rice cytosol 21.79 92.29
KRH09717 Soybean nucleus 92.0 92.2
KRH23587 Soybean nucleus 91.87 92.07
AT1G80070.1 Thale cress cytosol 90.94 91.1
Solyc07g008880.2.1 Tomato plastid 91.83 91.02
PGSC0003DMT400073947 Potato cytosol 91.66 90.67
GSMUA_AchrUn_... Banana nucleus 16.42 89.4
AT4G38780.1 Thale cress cytosol 86.12 87.26
Solyc06g043160.1.1 Tomato cytosol 1.61 73.08
CDY57684 Canola cytosol 1.02 45.28
Bra003548.1-P Field mustard cytosol 1.02 45.28
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10Gene3D:3.90.1570.40
UniProt:A0A1W0VRL2ncoils:CoilGO:GO:0000398GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0017070
GO:GO:0030623InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPNEnsemblPlants:OQU75900ProteinID:OQU75900
ProteinID:OQU75900.1PFAM:PD149576PFAM:PF01398PFAM:PF08082PFAM:PF08083PFAM:PF08084
PFAM:PF10596PFAM:PF10597PFAM:PF10598PFAM:PF12134InterPro:PRO8NTInterPro:PROCN
InterPro:PROCTInterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249PANTHER:PTHR11140InterPro:Prp8_U5-snRNA-bd
InterPro:Prp8_U6-snRNA-bdInterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232EnsemblPlantsGene:SORBI_3010G053600SUPFAM:SSF53098
UniParc:UPI0009DC8A32SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:4198395..4208341
Molecular Weight (calculated)
275917.0 Da
IEP (calculated)
8.979
GRAVY (calculated)
-0.477
Length
2363 amino acids
Sequence
(BLAST)
0001: MWNGAPPPPP PQMAAAPPPP GTTVPGAGQP PPPPPPAGAP QSGMPLTPAE LEAQLVEKAR KWHQLNSKRY GDKRKFGFVE AQKEDMPPEH VRKIIRDHGD
0101: MSSKKYRHDK RVYLGALKFV PHAVYKLLEN MPMPWEQVRH VKILYHITGA ITFVNEIPWV VEPIYLAQWG TMWIMMRREK RDRRHFKRMR FPPFDDEEPP
0201: LDYADNLLDV EPLEAIQLEL DEEEDAAVYE WFYDHKPLMK TKLINGPSYR KWHLSLPIMA TLYRLAGQLL SDLIDRNYFY LFDMESFFTA KALNMCIPGG
0301: PKFEPLYRDM EKGDEDWNEF NDINKLIIRQ PLRTEYRIAF PHLYNNRPRK VKLGIYHTPM IMYIKTEDPD LPAFYYDPLI NPITSTNKVD RRERKAAEEE
0401: DDEDFCLPED VEPLLKQTEL YTDTTAAGIS LLFAPKPFNM RSGRTRRAED IPLVSEWYKE HCPPAYPVKV RVSYQKLLKC YVLNELHHRP PKAQKKKHLF
0501: RSLQATKFFQ TTELDWAEAG LQVCKQGYNM LNLLIHRKNL NYLHLDYNFN LKPVKTLTTK ERKKSRFGNA FHLCREILRL TKLVVDANIQ FRLGNVDAFQ
0601: LADGLQYIFS HVGQLTGMYR YKYRLMRQIR MCKDLKHLIY YRFNTGPVGK GPGCGFWAPM WRVWLFFLRG IVPLLERWLG NLLARQFEGR HSKGVAKTVT
0701: KQRVESHFDL ELRAAVMHDV LDAMPEGIKQ NKARTILQHL SEAWRCWKAN IPWKVPGLPV PIENMILRYV KSKADWWTNV AHYNRERIRR GATVDKTVCR
0801: KNLGRLTRLW LKAEQERQHN YLKDGPYVTP EEAVAIYTTT VHWLESRKFS PIPFPPLSYK HDTKLLILAL ERLKESYSVA VRLNQLQREE LGLIEQAYDN
0901: PHEALSRIKR HLLTQRAFKE VGIEFMDLYS YLIPVYEIEP LEKITDAYLD QYLWYEGDKR HLFPNWVKPA DSEPPPLLVY KWCQGINNLL DIWDTSDGQC
1001: VVMLQTKFEK FFEKIDLTLL NRLLRLVLDH NIADYVTAKN NVVLSYKDMS HTNSYGLIRG LQFASFVVQY YGLVLDLLIL GLTRASEIAG PPQMPNEFLT
1101: YADTKVETRH PIRLYSRYID KVHILFRFTH EEARDLIQRY LTEHPDPNNE NMVGYNNKKC WPRDARMRLM KHDVNLGRSV FWDMKNRLPR SITTLEWENS
1201: FVSVYSKDNP NLLFSMCGFE VRILPKIRMT QEAFSNTKDG VWNLQNEQTK ERTAIAFLRV DDEHMKVFEN RVRQILMSSG STTFTKIVNK WNTALIGLMT
1301: YFREATVHTQ ELLDLLVKCE NKIQTRIKIG LNSKMPSRFP PVIFYTPKEI GGLGMLSMGH ILIPQSDLRY SKQTDVGVTH FRSGMSHEED QLIPNLYRYI
1401: QPWESEFIDS QRVWAEYALK RQEAQSQNRR LTLEDLEDSW DRGIPRINTL FQKDRHTLAY DKGWRVRTDF KQYQVLKQNP FWWTHQRHDG KLWNLNNYRT
1501: DVIQALGGVE GILEHTLFKG TYFPTWEGLF WEKASGFEES MKYKKLTNAQ RSGLNQIPNR RFTLWWSPTI NRANVYVGFQ VQLDLTGIFM HGKIPTLKIS
1601: LIQIFRAHLW QKIHESVVMD LCQVLDQELD ALEIETVQKE TIHPRKSYKM NSSCADILLF AAHRWTMSKP SLVSESKDLF DQKASNKYWI DVQLRWGDYD
1701: SHDIERYTRA KFMDYTTDNM SIYPSPTGVM IGIDLAYNLH SAFGNWFPGS KPLLQQAMNK IMKSNPALYV LRERIRKGLQ LYSSEPTEPY LSSQNYGEIF
1801: SNQIIWFVDD TNVYRVTIHK TFEGNLTTKP INGAIFIFNP RTGQLFLKVI HTSVWAGQKR LGQLAKWKTA EEVAALVRSL PVEEQPKQII VTRKGMLDPL
1901: EVHLLDFPNI VIKGSELQLP FQACLKIEKF GDLILKATEP QMVLYNIYDD WLKSISSYTA FSRIVLILRA LHVNNEKAKM LLKPDKTIVT EPHHIWPSLN
2001: DEQWLKVECA LRDLILSDYA KKNNVNTSAL TQSEMRDIIL GAEIAPPSQQ RQQIAEIEKQ SRETTQLTAV TTRTTNVHGD ELIITTTSPY EQQAFASKTD
2101: WRVRAISATN LYLRVNHIYV NSDDIKETGY TYIMPKNILK KFICIADLRT QIAGFLYGLS PQDNPQVKEI RCIAIPPQHG THQMVTLPTN LPEHEFLNDL
2201: EPLGWMHTQP NEAPQLSPQD LTSHAKILEN NKQWDGEKCI ILTCSFTPGS CSLTAYKLTP SGYEWGRSNK DNGSNPHGYL PTHYEKVQML LSDRFLGFYM
2301: IPDNAPWNFN FMGVKHDPQM KYNMKLGMPR DFYHEDHRPT HFLEFSNIEE GEVAEGDRED TFT
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.