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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plasma membrane, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:plasma membrane
nucleus: 26228564
msms PMID: 26228564 doi
E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G029700.1 Wheat plastid 99.87 99.75
TraesCS7D01G128800.1 Wheat cytosol, plastid 99.75 99.75
HORVU7Hr1G027000.2 Barley cytosol 98.43 98.89
TraesCS5A01G189600.1 Wheat unclear 98.01 98.13
Os06t0167000-02 Rice cytosol, nucleus, plastid 46.74 97.7
Zm00001d045199_P004 Maize cytosol 96.57 96.53
OQU75900 Sorghum cytosol 96.53 96.49
Zm00001d036301_P007 Maize plastid 95.94 95.77
VIT_09s0002g07070.t01 Wine grape cytosol 92.25 92.84
KRH09717 Soybean nucleus 91.79 91.94
KRH23587 Soybean nucleus 91.66 91.82
Os05t0163250-01 Rice cytosol 21.63 91.58
AT1G80070.1 Thale cress cytosol 91.24 91.35
Solyc07g008880.2.1 Tomato plastid 91.74 90.9
PGSC0003DMT400073947 Potato cytosol 91.62 90.58
GSMUA_AchrUn_... Banana nucleus 16.34 88.94
AT4G38780.1 Thale cress cytosol 86.66 87.78
Solyc06g043160.1.1 Tomato cytosol 1.61 73.08
CDY57684 Canola cytosol 1.06 47.17
Bra003548.1-P Field mustard cytosol 1.06 47.17
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10Gene3D:3.90.1570.40
ncoils:CoilGO:GO:0000398GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005681
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0017070GO:GO:0030623
InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPNPFAM:PD149576PFAM:PF01398PFAM:PF08082
PFAM:PF08083PFAM:PF08084PFAM:PF10596PFAM:PF10597PFAM:PF10598PFAM:PF12134
InterPro:PRO8NTInterPro:PROCNInterPro:PROCTInterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249
PANTHER:PTHR11140InterPro:Prp8_U5-snRNA-bdInterPro:Prp8_U6-snRNA-bdInterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232
SUPFAM:SSF53098EnsemblPlantsGene:TraesCS7A01G129700EnsemblPlants:TraesCS7A01G129700.1TIGR:cd08056TIGR:cd13838SEG:seg
Description
No Description!
Coordinates
chr7A:-:83537480..83546857
Molecular Weight (calculated)
275304.0 Da
IEP (calculated)
9.064
GRAVY (calculated)
-0.475
Length
2362 amino acids
Sequence
(BLAST)
0001: MWNGGPPPPL PPMAAAPPPP GTAGAGLPPP PPPPAAAPPQ AGQPLTPAEL EAQLVEKARK WHQLNSKRYG DKRKFGFVEA QKEDMPPEHV RKIIRDHGDM
0101: SSKKYRHDKR VYLGALKFVP HAVYKLLENM PMPWEQVRHV KILYHITGAI TFVNEIPWVV EPIYLAQWGS MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVE PLEAIQLELD PEEDGAVYNW FYDHNPLVKT NFINGPSYRK WNLSLPIMAT LYRLAGQLLS DLTDRNYFYL FDMESFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRQP LRTEYRIAFP HLYNNRPRKV RLCIYHTPMI MYIKTEDPDL PAFYYDPLIN PITSTSKVDR REKKASEEDD
0401: EDDFSLPEGV EPLLNRTPLY TDTTAAGISL LFAPRPFNMR SGRTRRAEDI PLVSEWFKEH CPPAYPVKVR VSYQKLLKCY VLNELHHRPP KAQKKKHLFR
0501: SLQATKFFQS TELDWAEAGL QVCKQGYNML NLLIHRKNLN YLHLDYNFNL KPVKTLTTKE RKKSRFGNAF HLCREILRLT KLVVDANIQF RLGNVDAFQL
0601: ADGLQYIFSH VGQLTGMYRY KYRLMRQIRM CKDLKHLIYY RFNTGPVGKG PGCGFWAPMW RVWLFFLRGI VPLLERWLGN LLARQFEGRH SKGVAKTVTK
0701: QRVESHFDLE LRAAVMHDVL DAMPEGIKQN KARTILQHLS EAWRCWKANI PWKVPGLPVP IENMILRYVK SKADWWTNVA HYNRERIRRG ATVDKTVCRK
0801: NLGRLTRLWL KAEQERQHNY LKDGPYVTPE EAVAIYTTTV HWLESRKFSP IPFPPLSYKH DTKLLILALE RLKESYSVAV RLNQLQREEL GLIEQAYDNP
0901: HEALSRIKRH LLTQRAFKEV GIEFMDLYSY LIPVYEIEPL EKITDAYLDQ YLWYEGDKRH LFPNWVKPAD SEPPPLLVYK WCQGINNLQD IWDTSDGQCV
1001: VMLQTKFEKF FEKIDLTLLN RLLRLVLDHN IADYVTAKNN VVLSYKDMSH TNSYGLIRGL QFASFIVQYY GLVLDLLLLG LTRASEIAGP PQMPNEFLTY
1101: TDTKVETRHP IRLYSRYIDK VHIMFRFTHE EARDLIQRYL TEHPDPNNEN MVGYNNKKCW PRDARMRLMK HDVNLGRSVF WDMKNRLPRS ITTLEWENGF
1201: VSVYSKDNPN LLFSMSGFEV RILPKIRMTQ EAFSNTKDGV WNLQNEQTKE RTAIAFLRVD DEHMKVFENR VRQILMSSGS TTFTKIVNKW NTALIGLMTY
1301: FREATVHTQE LLDLLVKCEN KIQTRIKIGL NSKMPSRFPP VIFYTPKEIG GLGMLSMGHI LIPQSDLRYS KQTDVGVTHF RSGMSHEEDQ LIPNLYRYIQ
1401: PWESEFIDSQ RVWAEYALKR QEAQSQNRRL TLEDLEDSWD RGIPRINTLF QKDRHTLAYD KGWRVRTDFK QYQVLKQNPF WWTHQRHDGK LWNLNNYRTD
1501: VIQALGGVEG ILEHTLFKGT YFPTWEGLFW EKASGFEESM KYKKLTNAQR SGLNQIPNRR FTLWWSPTIN RANVYVGFQV QLDLTGIFMH GKIPTLKISL
1601: IQIFRAHLWQ KVHESVVMDL CQVLDQELDA LEIETVQKET IHPRKSYKMN SSCADVLLFA AHRWQMSKPS LVSESKDVFD QKASNKYWID VQLRWGDYDS
1701: HDIERYTRAK FMDYTTDNMS IYPSPTGVMI GLDLAYNLHS AFGNWFPGSK PLLQQAMNKI MKSNPALYVL RERIRKGLQL YSSEPTEPYL SSQNYGEIFS
1801: NQIIWFVDDT NVYRVTIHKT FEGNLTTKPI NGAIFIFNPR TGQLFLKVIH TSVWAGQKRL GQLAKWKTAE EVAALVRSLP VEEQPKQIIV TRKGMLDPLE
1901: VHLLDFPNIV IKGSELQLPF QACLKIEKFG DLILKATEPQ MVLYNIYDDW LKSISSYTAF SRLVLILRAL HVNNEKAKML LKPDKTIVTE PHHIWPSLTD
2001: EQWLKVECAL RDLILSDYAK KNNVNTSALT QSEIRDIILG AEIAPPSQQR QQIAEIEKQS RETNQVTAQT TRTVNVHGDE LIVTTTSPYE QAAFASKTDW
2101: RVRAISATNL YLRVNHIYVN SDDIKETGYT YIMPKNILKK FICIADLRTQ VAGFLYGLSP QDNPQVKEIR CISIPPQHGT HQMVTLPSNL PEHEFLADLE
2201: PLGWMHTQPN EAPQLSPQDL TSHAKILENN KQWDGEKCII LTCSFTPGSC SLTAYKLTPS GYEWARGNKD NGSNPQGYLP THYEKVQMLL SDRFLGFYMV
2301: PDNAPWNYNF MGVKHDPLMK YSMKLGTPRD FYHEDHRPTH FLEFSNIEEG EVAEGDREDT FS
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.