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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G073700.1 Barley cytosol 1.25 100.0
Os06t0167000-02 Rice cytosol, nucleus, plastid 47.84 98.23
TraesCS5A01G189600.1 Wheat unclear 99.22 97.58
TraesCS5D01G201300.1 Wheat cytosol 99.18 97.58
TraesCS5B01G193600.1 Wheat golgi 99.05 97.46
HORVU7Hr1G027000.2 Barley cytosol 98.53 97.24
Zm00001d045199_P004 Maize cytosol 97.76 95.98
OQU75900 Sorghum cytosol 97.72 95.94
Zm00001d036301_P007 Maize plastid 97.54 95.65
VIT_09s0002g07070.t01 Wine grape cytosol 93.92 92.84
KRH09717 Soybean nucleus 93.15 91.65
KRH23587 Soybean nucleus 93.02 91.52
Solyc07g008880.2.1 Tomato plastid 93.15 90.65
PGSC0003DMT400073947 Potato cytosol 93.06 90.37
GSMUA_AchrUn_... Banana nucleus 16.64 88.94
Os05t0163250-01 Rice cytosol 21.12 87.81
Solyc06g043160.1.1 Tomato cytosol 1.64 73.08
CDY57684 Canola cytosol 1.08 47.17
Bra003548.1-P Field mustard cytosol 1.08 47.17
HORVU7Hr1G051980.3 Barley cytosol, mitochondrion, nucleus 3.15 47.1
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10Gene3D:3.90.1570.40
UniProt:A0A287RD62ncoils:CoilGO:GO:0000398GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0017070
GO:GO:0030623EnsemblPlantsGene:HORVU5Hr1G058160EnsemblPlants:HORVU5Hr1G058160.6InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPN
PFAM:PD149576PFAM:PF01398PFAM:PF08082PFAM:PF08083PFAM:PF08084PFAM:PF10596
PFAM:PF10597PFAM:PF10598PFAM:PF12134InterPro:PRO8NTInterPro:PROCNInterPro:PROCT
InterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249PANTHER:PTHR11140InterPro:Prp8_U5-snRNA-bdInterPro:Prp8_U6-snRNA-bd
InterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232SUPFAM:SSF53098UniParc:UPI000B462DD3SEG:seg
Description
No Description!
Coordinates
chrchr5H:+:454560716..454571978
Molecular Weight (calculated)
271346.0 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.468
Length
2320 amino acids
Sequence
(BLAST)
0001: QPLTPAELEA QLVEKARKWH QLNSKRYGDK RKFGFVEAQK EDMPPEHVRK IIRDHGDMSS KKYRHDKRVY LGALKFVPHA VYKLLENMPM PWEQVRHVKI
0101: LYHITGAITF VNEIPWVVEP IYLAQWGSMW IMMRREKRDR RHFKRMRFPP FDDEEPPLDY ADNLLDVEPL EAIQLELDPE EDGAVYKWFY DHKPLVKTKL
0201: INGPSYRKWH LSLPIMATLY RLAGQLLSDL IDRNYFYLFD MESFFTAKAL NMCIPGGPKF EPLYRDMEKG DEDWNEFNDI NKLIIRQPLR TEYRIAFPHL
0301: YNNRPRKVRL CIYHTPMIMY IKTEDPDLPA FYYDPLINPI TSTSKIDRRE KKASEEEDED DFSLPDGVGP LLEKTPLYTD TTAAGISLLF APKPFNMRSG
0401: RTRRAEDIPL VSEWFKEHCP PAYPVKVCVS YQKLLKCYVL NELHHRPPKA QKKKHLFRSL QATKFFQTTE LDWAEAGLQV CKQGYNMLNL LIHRKNLNYL
0501: HLDYNFNLKP VKTLTTKERK KSRFGNAFHL CREILRLTKL VVDANIQFRL GNVDAFQLAD GLQYIFSHVG QLTGMYRYKY RLMRQIRMCK DLKHLIYYRF
0601: NTGPVGKGPG CGFWAPMWRV WLFFLRGIVP LLERWLGNLL ARQFEGRHSK GVAKTVTKQR VEAHFDLELR AAVMHDVLDA MPEGIKQNKA RTILQHLSEA
0701: WRCWKANIPW KVPGLPVPIE NMILRYVKSK ADWWTNVAHY NRERIRRGAT VDKTVCRKNL GRLTRLWLKA EQERQHNYLK DGPYVTPEEA VAIYTTTVHW
0801: LESRKFSPIP FPPLSYKHDT KLLILALERL KESYSVAVRL NQLQREELGL IEQAYDNPHE ALSRIKRHLL TQRAFKEVGI EFMDLYSYLI PVYEIEPLEK
0901: ITDAYLDQYL WYEGDKRHLF PNWIKPADSE PPPLLVYKWC QGINNLQDIW DTSDGQCVVM LQTKFEKFFE KIDLTLLNRL LRLVLDHNIA DYVTAKNNVV
1001: LSYKDMSHTN SYGLIRGLQF ASFVVQYYGL VLDLLLLGLT RASEIAGPPQ MPNEFLTYTD TKVETRHPIR LYSRYIDKVH IMFRFTHEEA RDLIQRYLTE
1101: HPDPNNENMV GYNNKKCWPR DARMRLMKHD VNLGRSVFWD MKNRLPRSIT TLEWENGFVS VYSKDNPNLL FSMSGFEVRI LPKIRMTQEA FSNTKDGVWN
1201: LQNEQTKERT AIAFLRVDDE HMKVFENRVR QILMSSGSTT FTKIVNKWNT ALIGLMTYFR EATVHTQELL DLLVKCENKI QTRIKIGLNS KMPSRFPPVI
1301: FYTPKEIGGL GMLSMGHILI PQSDLRYSKQ TDVGVTHFRS GMSHEEDQLI PNLYRYIQPW ESEFIDSQRV WAEYALKRQE AQSQNRRLTL EDLEDSWDRG
1401: IPRINTLFQK DRHTLAYDKG WRVRTDFKQY QVLKQNPFWW THQRHDGKLW NLNNYRTDVI QALGGVEGIL EHTLFKGTYF PTWEGLFWEK ASGFEESMKY
1501: KKLTNAQRSG LNQIPNRRFT LWWSPTINRA NVYVGFQVQL DLTGIFMHGK IPTLKISLIQ IFRAHLWQKV HESVVMDLCQ VLDQELDALE IETVQKETIH
1601: PRKSYKMNSS CADVLLFAAH RWQMSKPSLV SESKDVFDQK ASNKYWIDVQ LRWGDYDSHD IERYTRAKFM DYTTDNMSIY PSPTGVMIGL DLAYNLHSAF
1701: GNWFPGSKPL LQQAMNKIMK SNPALYVLRE RIRKGLQLYS SEPTEPYLSS QNYGEIFSNQ IIWFVDDTNV YRVTIHKTFE GNLTTKPING AIFIFNPRTG
1801: QLFLKVIHTS VWAGQKRLGQ LAKWKTAEEV AALVRSLPVE EQPKQIIVTR KGMLDPLEVH LLDFPNIVIK GSELQLPFQA CLKIEKFGDL ILKATEPQMV
1901: LYNIYDDWLK SISSYTAFSR LVLILRALHV NNEKAKMLLK PDKTIVTEPH HIWPSLTDEQ WLKVECALRD LILSDYAKKN NVNTSALTQS EIRDIILGAE
2001: IAPPSQQRQQ IAEIEKQSKE TTQLNAVTTR TTNVHGDELI ITTTSPYEQA AFASKTDWRV RAISATNLYL RVNHIYVNSD DIKETGYTYI MPKNILKKFI
2101: CIADLRTQVA GFLYGLSPQD NPQVKEIRCI SIPPQHGTHQ MVTLPANLPE HEFLADLEPL GWMHTQPNEA PQLSPQDLTS HSKILENNKQ WDGEKCIILT
2201: CSFTPGSCSL TAYKLTPSGY EWGRSNKDNG SNPHGYLPTH YEKVQMLLSD RFLGFYMVPD NAPWNYNFMG VKHDPLMKYS MKLGTPRDFY HEDHRPTHFL
2301: EFSNIEEGEV AEGDREDTFS
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.