CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94018	Soybean	cytosol, golgi, plasma membrane	75.61	39.49
KRH71932	Soybean	cytosol	71.95	35.76
PGSC0003DMT400047651	Potato	mitochondrion	48.78	24.39
KRH24013	Soybean	cytosol	75.61	20.6
KRH29305	Soybean	cytosol	79.27	19.64
VIT_16s0098g01400.t01	Wine grape	cytosol	64.63	17.79
HORVU7Hr1G011300.2	Barley	cytosol	54.88	17.72
Bra026309.1-P	Field mustard	cytosol	63.41	17.05
CDY19027	Canola	cytosol	63.41	17.05
CDX89229	Canola	cytosol	63.41	17.05
GSMUA_Achr1P07860_001	Banana	cytosol	63.41	16.94
AT4G27750.1	Thale cress	cytosol	62.2	16.72
PGSC0003DMT400047652	Potato	cytosol	58.54	16.33
Solyc03g082820.2.1	Tomato	cytosol	57.32	15.99
TraesCS4A01G428600.1	Wheat	cytosol	54.88	15.46
TraesCS7A01G061200.1	Wheat	cytosol	54.88	15.46
EER89112	Sorghum	nucleus	54.88	15.15
Zm00001d045493_P002	Maize	mitochondrion	54.88	15.15
Os06t0129300-01	Rice	cytosol	53.66	14.57

Protein Annotations

EMBL:ACUP02012213	EnsemblPlants:KRG89489	EnsemblPlantsGene:GLYMA_20G026200	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-type_fold
InterPro:Cell_div_Cdc14	PANTHER:PTHR34065	PFAM:PF08045	ProteinID:KRG89489	ProteinID:KRG89489.1	SUPFAM:SSF48371
UniParc:UPI00029525AE	UniProt:K7N0Z4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:2873050..2873470

Molecular Weight (calculated)

9053.1 Da

IEP (calculated)

4.848

GRAVY (calculated)

0.363

Length

82 amino acids

Sequence
(BLAST)

1: MATMMWSLER SDWDSVKVVE LALRVLEGCF LLHPQSTALA HQHNAIQVLM NILSTRGVLE QGACLDALIS LMVDSSSNQM VP

Best Arabidopsis Sequence Match ( AT4G27750.1 )
(BLAST)

001: MYLKRPIWSD GASATPENPS ESETGEESDA ASMVVEELVT SLNTQRLYRE LTLSLRTGLR DACAEFSFLR IRGLRSLLKT LRTVADSDSI IRLFSHTQTI
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY

Arabidopsis Description

ISI1ISI1 [Source:UniProtKB/TrEMBL;Acc:A0A178URL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.