Factsheet for HORVU7Hr1G011300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G060490.5
HORVU6Hr1G050500.2
HORVU6Hr1G050520.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27750.1	HORVU1Hr1G060490.5	AT5G05410.1	18552202
AT4G27750.1	HORVU6Hr1G050500.2	AT5G05410.1	18552202
AT4G27750.1	HORVU6Hr1G050520.2	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G061200.1	Wheat	cytosol	98.82	86.25
TraesCS4A01G428600.1	Wheat	cytosol	98.43	85.91
EER89112	Sorghum	nucleus	90.16	77.1
Zm00001d045493_P002	Maize	mitochondrion	89.37	76.43
Os06t0129300-01	Rice	cytosol	88.58	74.5
PGSC0003DMT400047651	Potato	mitochondrion	37.4	57.93
GSMUA_Achr1P07860_001	Banana	cytosol	69.69	57.65
VIT_16s0098g01400.t01	Wine grape	cytosol	66.14	56.38
KRH24013	Soybean	cytosol	66.54	56.15
PGSC0003DMT400047652	Potato	cytosol	64.96	56.12
Solyc03g082820.2.1	Tomato	cytosol	64.57	55.78
KRG89489	Soybean	cytosol, extracellular, vacuole	17.72	54.88
Bra026309.1-P	Field mustard	cytosol	61.42	51.15
CDY19027	Canola	cytosol	61.42	51.15
CDX89229	Canola	cytosol	61.42	51.15
AT4G27750.1	Thale cress	cytosol	61.42	51.15
KRH29305	Soybean	cytosol	66.54	51.06
KRH71932	Soybean	cytosol	25.98	40.0
KRG94018	Soybean	cytosol, golgi, plasma membrane	23.23	37.58

Protein Annotations

EnsemblPlants:HORVU7Hr1G011300.2	EnsemblPlantsGene:HORVU7Hr1G011300	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005975
GO:GO:0006109	GO:GO:0008150	GO:GO:0008152	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Cell_div_Cdc14
InterPro:IPR011989	PANTHER:PTHR34065	PANTHER:PTHR34065:SF2	PFAM:PF08045	SEG:seg	SUPFAM:SSF48371
UniParc:UPI000B47E44E	UniProt:A0A287VIC8	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:15921767..15924517

Molecular Weight (calculated)

28161.2 Da

IEP (calculated)

5.607

GRAVY (calculated)

0.071

Length

254 amino acids

Sequence
(BLAST)

001: EVTLALRAGL RDAGADFSFL RARGLRGLLG FLRSTAAAPD DSQLLLFRHS QSIPDLQVIP VLFQNSLHQP KDPVVTLDHI FGVEPTKITS PSTDSEIALA
101: LRVLEGCCLL YSRCTALAHK YKAVQVLLNI LASRGPTEQG VCLDALISLM LDSPSNQIDF EEYSGLEKVA ELLKDVQVEE HIRLKCGEFL LLLIGHVYVK
201: ENTPIHEQMR NLLGEQCASL IWAASRFGST LDAEQRQMAL QIQARRVVES LEPY

Best Arabidopsis Sequence Match ( AT4G27750.1 )
(BLAST)

001: MYLKRPIWSD GASATPENPS ESETGEESDA ASMVVEELVT SLNTQRLYRE LTLSLRTGLR DACAEFSFLR IRGLRSLLKT LRTVADSDSI IRLFSHTQTI
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY

Arabidopsis Description

ISI1ISI1 [Source:UniProtKB/TrEMBL;Acc:A0A178URL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.