Factsheet for VIT_16s0098g01400.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047652	Potato	cytosol	75.84	76.87
Solyc03g082820.2.1	Tomato	cytosol	75.17	76.19
KRH24013	Soybean	cytosol	74.83	74.09
Bra026309.1-P	Field mustard	cytosol	71.48	69.84
CDY19027	Canola	cytosol	71.48	69.84
CDX89229	Canola	cytosol	71.48	69.84
AT4G27750.1	Thale cress	cytosol	71.14	69.51
KRH29305	Soybean	cytosol	76.85	69.18
PGSC0003DMT400047651	Potato	mitochondrion	37.92	68.9
HORVU7Hr1G011300.2	Barley	cytosol	56.38	66.14
KRG89489	Soybean	cytosol, extracellular, vacuole	17.79	64.63
GSMUA_Achr1P07860_001	Banana	cytosol	66.11	64.17
TraesCS7A01G061200.1	Wheat	cytosol	60.4	61.86
TraesCS4A01G428600.1	Wheat	cytosol	60.07	61.51
Os06t0129300-01	Rice	cytosol	60.07	59.27
EER89112	Sorghum	nucleus	59.06	59.26
Zm00001d045493_P002	Maize	mitochondrion	58.39	58.59
KRH71932	Soybean	cytosol	26.17	47.27
KRG94018	Soybean	cytosol, golgi, plasma membrane	21.48	40.76

Protein Annotations

EntrezGene:100241859	wikigene:100241859	MapMan:35.2	InterPro:ARM-type_fold	ProteinID:CCB48066	ProteinID:CCB48066.1
InterPro:Cell_div_Cdc14	UniProt:F6H7D2	EMBL:FN595247	GO:GO:0003674	GO:GO:0005488	EntrezGene:LOC100241859
wikigene:LOC100241859	PFAM:PF08045	PANTHER:PTHR34065	SUPFAM:SSF48371	TIGR:TC59893	UniParc:UPI00015CB8A8
ArrayExpress:VIT_16s0098g01400	EnsemblPlantsGene:VIT_16s0098g01400	EnsemblPlants:VIT_16s0098g01400.t01	unigene:Vvi.2724	RefSeq:XP_002275469	RefSeq:XP_002275469.1

Description

No Description!

Coordinates

chr16:+:21625364..21629130

Molecular Weight (calculated)

33513.5 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.074

Length

298 amino acids

Sequence
(BLAST)

001: MYLKKALWSE SMATPESDQK APYPATAVGD LVTSLNRQRL YREVTLALRT GLREARAEFS FLRVRGLRSI LKFLRSVAES DSTINLFCHS QSIPELQVVP
101: VLFQNSLKQY EEDTVANLDH IFGVEPMKIS SPSTDAEVAL ALRVLEGCCL LHRESTIFAH QHKAIEILMD ILSTRGVLEQ GACLDALISI MLDSSANQMD
201: FESCDGIEEV AHIIRDKQVD ENLRMKCGEF LLLLIGHVNG RERPPLARIH EDVRRLLGEK SASLIWAASQ FGSTLDPEQR LTALHIQARR VLESLDLY

Best Arabidopsis Sequence Match ( AT4G27750.1 )
(BLAST)

001: MYLKRPIWSD GASATPENPS ESETGEESDA ASMVVEELVT SLNTQRLYRE LTLSLRTGLR DACAEFSFLR IRGLRSLLKT LRTVADSDSI IRLFSHTQTI
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY

Arabidopsis Description

ISI1ISI1 [Source:UniProtKB/TrEMBL;Acc:A0A178URL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.