CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29305	Soybean	cytosol	89.37	81.27
KRG89489	Soybean	cytosol, extracellular, vacuole	20.6	75.61
VIT_16s0098g01400.t01	Wine grape	cytosol	74.09	74.83
PGSC0003DMT400047652	Potato	cytosol	71.1	72.79
Solyc03g082820.2.1	Tomato	cytosol	70.43	72.11
Bra026309.1-P	Field mustard	cytosol	67.77	66.89
CDX89229	Canola	cytosol	67.77	66.89
AT4G27750.1	Thale cress	cytosol	67.77	66.89
CDY19027	Canola	cytosol	67.44	66.56
HORVU7Hr1G011300.2	Barley	cytosol	56.15	66.54
PGSC0003DMT400047651	Potato	mitochondrion	35.55	65.24
TraesCS7A01G061200.1	Wheat	cytosol	59.8	61.86
GSMUA_Achr1P07860_001	Banana	cytosol	62.13	60.91
TraesCS4A01G428600.1	Wheat	cytosol	58.8	60.82
Os06t0129300-01	Rice	cytosol	59.14	58.94
EER89112	Sorghum	nucleus	57.48	58.25
Zm00001d045493_P002	Maize	mitochondrion	56.81	57.58
KRH71932	Soybean	cytosol	30.9	56.36
KRG94018	Soybean	cytosol, golgi, plasma membrane	24.58	47.13

Protein Annotations

EMBL:ACUP02007166	EMBL:BT093232	EnsemblPlants:KRH24013	EnsemblPlantsGene:GLYMA_12G016600	EntrezGene:100819127	GO:GO:0003674
GO:GO:0005488	InterPro:ARM-type_fold	InterPro:Cell_div_Cdc14	PANTHER:PTHR34065	PFAM:PF08045	ProteinID:KRH24013
ProteinID:KRH24013.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0001B1637B	UniProt:C6T713	MapMan:35.2

Description

hypothetical protein

Coordinates

chr12:+:1175266..1179099

Molecular Weight (calculated)

33669.4 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.123

Length

301 amino acids

Sequence
(BLAST)

001: MYLKEPLWSE TGKGDGSAKT EDYGAVSEVV KSLQQQRVYR EVTLALRTGL RDARAEFSFL RVRALRSILK FLRSVAESDS TIDLFNQIQS IPQLQVVPVL
101: FQHSLKESGD EYSENRVGDL SHIFGVEPMK LTSPSTDAEV ALALRVLEGC CLLHPHSTAL AHQHNAIQVL MNILSTRGVL EQGACLDALI SLMVDSSFNQ
201: MDFEKCSGIM EVADLLRDQE LDEDLRLKCG EFLLLLIGHV NGRDTPPLAT IHEDTRRLLG EKSASLIWAA SRQFDSTLDT EQRLTALQIQ ARRVLESLDL
301: Y

Best Arabidopsis Sequence Match ( AT4G27750.1 )
(BLAST)

001: MYLKRPIWSD GASATPENPS ESETGEESDA ASMVVEELVT SLNTQRLYRE LTLSLRTGLR DACAEFSFLR IRGLRSLLKT LRTVADSDSI IRLFSHTQTI
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY

Arabidopsis Description

ISI1ISI1 [Source:UniProtKB/TrEMBL;Acc:A0A178URL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.