Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00416 | Soybean | nucleus | 99.17 | 60.0 |
| KRH08285 | Soybean | nucleus | 99.17 | 60.0 |
| KRH40768 | Soybean | nucleus | 99.17 | 60.0 |
| KRH65451 | Soybean | nucleus | 99.17 | 60.0 |
| EES16412 | Sorghum | nucleus | 97.52 | 59.0 |
| TraesCS4A01G298000.1 | Wheat | nucleus | 97.52 | 59.0 |
| TraesCS4D01G014000.2 | Wheat | nucleus | 97.52 | 59.0 |
| Os03t0657000-01 | Rice | nucleus | 98.35 | 58.62 |
| TraesCS5A01G022000.1 | Wheat | nucleus | 95.87 | 58.0 |
| TraesCS5D01G027800.3 | Wheat | nucleus | 95.87 | 58.0 |
| TraesCS5B01G018500.1 | Wheat | nucleus | 95.87 | 57.71 |
| Os12t0580300-01 | Rice | nucleus | 97.52 | 56.73 |
| TraesCS4B01G015700.2 | Wheat | nucleus | 84.3 | 45.54 |
| HORVU4Hr1G002400.5 | Barley | golgi | 97.52 | 35.01 |
| KRH69926 | Soybean | cytosol, nucleus, plastid | 35.54 | 34.96 |
| KRG94819 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.3.5.3.1 | MapMan:15.4.1 | Gene3D:3.30.310.10 | UniProt:A0A0R0ELB5 | EMBL:ACUP02012038 | EnsemblPlantsGene:GLYMA_19G1112002 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006352 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR012295 | EnsemblPlants:KRG94816 |
| ProteinID:KRG94816 | ProteinID:KRG94816.1 | PFAM:PF00352 | PRINTS:PR00686 | ScanProsite:PS00351 | PANTHER:PTHR10126 |
| PANTHER:PTHR10126:SF36 | SUPFAM:SSF55945 | InterPro:TBP | InterPro:TBP_CS | InterPro:TBP_dom_sf | UniParc:UPI0006ED6572 |
Description
hypothetical protein
Coordinates
chr19:-:36547565..36549917
Molecular Weight (calculated)
13768.9 Da
IEP (calculated)
10.210
GRAVY (calculated)
-0.133
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: VCTGAKSEQQ SKLAARKYAR IIQKLGFPAK FKDFKIQNIV GSCDVKFPIR LEGLAYSHSA FSSYEPELFP GLIYRMKQPK IVLLIFVSGK IVLTGAKVRD
101: ETYTAFENIY PVLTEFRKNQ Q
101: ETYTAFENIY PVLTEFRKNQ Q
001: MADQGTEGSQ PVDLTKHPSG IVPTLQNIVS TVNLDCKLDL KAIALQARNA EYNPKRFAAV IMRIREPKTT ALIFASGKMV CTGAKSEHLS KLAARKYARI
101: VQKLGFPAKF KDFKIQNIVG SCDVKFPIRL EGLAYSHSAF SSYEPELFPG LIYRMKLPKI VLLIFVSGKI VITGAKMREE TYTAFENIYP VLREFRKVQQ
101: VQKLGFPAKF KDFKIQNIVG SCDVKFPIRL EGLAYSHSAF SSYEPELFPG LIYRMKLPKI VLLIFVSGKI VITGAKMREE TYTAFENIYP VLREFRKVQQ
Arabidopsis Description
TBP2TATA-box-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P28148]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.