CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91999	Soybean	nucleus	89.19	19.94
TraesCS2A01G549300.1	Wheat	nucleus, plastid	54.05	9.83
Zm00001d001894_P001	Maize	mitochondrion	50.0	9.71
KXG27398	Sorghum	plastid	50.0	9.56
TraesCS2D01G549900.1	Wheat	nucleus, plastid	50.0	9.05
TraesCS2B01G579700.1	Wheat	nucleus, plastid	50.0	8.98
Os04t0670900-00	Rice	nucleus	47.3	8.97
GSMUA_AchrUn_...	Banana	nucleus, plastid	50.0	8.67
KRH45200	Soybean	nucleus	16.22	3.68
KRG93139	Soybean	nucleus	14.86	3.45
KRH36366	Soybean	nucleus	14.86	3.38
KRH01509	Soybean	nucleus	14.86	3.34
KRH41057	Soybean	nucleus	12.16	2.71
KRH59736	Soybean	nucleus	9.46	1.88

Protein Annotations

EMBL:ACUP02006630	EnsemblPlants:KRH34785	EnsemblPlantsGene:GLYMA_10G206000	ncoils:Coil	PANTHER:PTHR33492	PANTHER:PTHR33492:SF2
ProteinID:KRH34785	ProteinID:KRH34785.1	UniParc:UPI0002961A62	UniProt:K7LKJ6	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:+:43754165..43755526

Molecular Weight (calculated)

8495.2 Da

IEP (calculated)

10.456

GRAVY (calculated)

-0.797

Length

74 amino acids

Sequence
(BLAST)

1: MQSASVLARA LRSCEEKKEK RHREMIELEQ RRIQMEEARN EVHRQGIATL VAAVTNLSGA IQSLINNSER HGQR

Best Arabidopsis Sequence Match ( AT1G31310.1 )
(BLAST)

001: MADQSGGLVM MREYRKGNWT LNETMVLIEA KRMDDERRMR RSIGLPPPEQ QQDIRSNKPA ELRWKWIEDY CWRKGCMRSQ NQCNDKWDNL MRDYKKVREY
101: ERRRVESSIT AGESSSSSAP AGETASYWKM EKSERKERSL PSNMLPQTYQ ALFEVVESKT LPSSTAVTAV TAAVAAAAAA ISSGNGSGGG QIQKVIQQGL
201: GFVVPKVHQI IQQQPVLLPL QPPPPPPPSQ PLPRPLLLPP PPPPSFHAQP ILPTKDSSTD SDTSEYSDTS PAKRRRTMPT TTTAGPSGGG VDVEEVGRSK
301: RDEETTVAAA LSRSVSVIAN AIRESEERQD RRHKEVMNVQ ERRLKIEESN VEMNREGMNG LVEAINKLAS SIFALASSSR HNN

Arabidopsis Description

Hydroxyproline-rich glycoprotein family protein [Source:UniProtKB/TrEMBL;Acc:F4I9C1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.