Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001894_P001 | Maize | mitochondrion | 66.93 | 67.98 |
| Os04t0670900-00 | Rice | nucleus | 62.02 | 61.54 |
| TraesCS2B01G579700.1 | Wheat | nucleus, plastid | 58.4 | 54.85 |
| TraesCS2D01G549900.1 | Wheat | nucleus, plastid | 57.11 | 54.03 |
| TraesCS2A01G549300.1 | Wheat | nucleus, plastid | 54.26 | 51.6 |
| KRH34785 | Soybean | cytosol | 9.56 | 50.0 |
| KRG91999 | Soybean | nucleus | 37.98 | 44.41 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 47.29 | 42.86 |
| EER93695 | Sorghum | nucleus | 28.42 | 30.56 |
| KXG30289 | Sorghum | plastid | 21.45 | 23.78 |
| OQU88149 | Sorghum | nucleus | 16.54 | 21.33 |
| KXG26157 | Sorghum | nucleus | 18.86 | 20.28 |
Protein Annotations
| EnsemblPlants:KXG27398 | EnsemblPlantsGene:SORBI_3006G261200 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil | PANTHER:PTHR33492 |
| PANTHER:PTHR33492:SF2 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:KXG27398 | ProteinID:KXG27398.1 | SEG:seg |
| UniParc:UPI00081AD543 | UniProt:A0A1B6PNZ9 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:59608893..59612102
Molecular Weight (calculated)
41383.7 Da
IEP (calculated)
10.119
GRAVY (calculated)
-0.667
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSANTVAKAA AAPMTPAASS DPSPSSSSGA GASPSPLALL RPHQYPHGHG HMTPPSPALT APPPSPASAP RDYRKGNWTL QETLILITAK RLDDDRRAGG
101: GHGHHGHGVP PAVAGSPTTP RSAEQRWKWV ENYCWNHGCL RSQNQCNDKW DNLLRDYKKV RDYESRAAAV TAPATAAPAR GLPSYWAMER PERKDRNLPT
201: NLAPEVFDAL TDVLSRRAAR RGGAAIAAAP PPPLALPPPP PPPSPPKPLL VQPRAPPPPP PLPLPAVAMA PPATSVSAEE LTGSSESGED GSDGGEPEPK
301: RRRLNRLGSS VVRSATVLAR TLVACEEKRE RRHREVLELE ERRLRLEEER TEVRRQGFAG LVSAVNSLSS AIHALVSDHR SGDSASR
101: GHGHHGHGVP PAVAGSPTTP RSAEQRWKWV ENYCWNHGCL RSQNQCNDKW DNLLRDYKKV RDYESRAAAV TAPATAAPAR GLPSYWAMER PERKDRNLPT
201: NLAPEVFDAL TDVLSRRAAR RGGAAIAAAP PPPLALPPPP PPPSPPKPLL VQPRAPPPPP PLPLPAVAMA PPATSVSAEE LTGSSESGED GSDGGEPEPK
301: RRRLNRLGSS VVRSATVLAR TLVACEEKRE RRHREVLELE ERRLRLEEER TEVRRQGFAG LVSAVNSLSS AIHALVSDHR SGDSASR
001: MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.