Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G549900.1 | Wheat | nucleus, plastid | 88.83 | 89.49 |
| TraesCS2A01G549300.1 | Wheat | nucleus, plastid | 78.88 | 79.85 |
| Os04t0670900-00 | Rice | nucleus | 59.22 | 62.56 |
| Zm00001d001894_P001 | Maize | mitochondrion | 55.83 | 60.37 |
| KXG27398 | Sorghum | plastid | 54.85 | 58.4 |
| KRH34785 | Soybean | cytosol | 8.98 | 50.0 |
| KRG91999 | Soybean | nucleus | 36.65 | 45.62 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 43.2 | 41.69 |
| TraesCS4B01G019200.1 | Wheat | nucleus | 24.76 | 30.82 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 15.05 | 20.53 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 16.75 | 19.83 |
| TraesCS5B01G447700.1 | Wheat | plastid | 16.99 | 19.23 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G579700.1 | EnsemblPlantsGene:TraesCS2B01G579700 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil | PANTHER:PTHR33492 |
| PANTHER:PTHR33492:SF2 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:767640577..767642613
Molecular Weight (calculated)
44449.1 Da
IEP (calculated)
9.739
GRAVY (calculated)
-0.775
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASSDPSPS SSSAAAAASA SPLAAYHAHP HHPHPHHLHL STPPHAYPPA APPPSPASAP RDYRKGNWTL HETLILITAK RLDDDRRAGG GAGGVAMAGP
101: SSPPTPRSAE QRWKWVENYC WINGCLRSQN QCNDKWDNLL RDYKKVRDYE TRRASIAAAP PVDAAPSAQP QPQTPLPSYW TMERHDRKER NLPTNLAPEV
201: YDALLDVLSR RAARRGGAAI APAAPAPLAL PPPPPPPPPP PSPPKPLLNQ QQQQQQQKQH RLHPQPPPLL QLPAPVAQPS VPSATSVSAE EEMTGSSESG
301: SDGLDLGGMS GGVGGNGDEP EAKRRRRAER LGSSVVRSAT VLARTLVACE DRRERRHREV LELEERRLRL EAERNEVRRQ GFAGLVAAVN GLSGAIHALV
401: SDHHGRSGDS SR
101: SSPPTPRSAE QRWKWVENYC WINGCLRSQN QCNDKWDNLL RDYKKVRDYE TRRASIAAAP PVDAAPSAQP QPQTPLPSYW TMERHDRKER NLPTNLAPEV
201: YDALLDVLSR RAARRGGAAI APAAPAPLAL PPPPPPPPPP PSPPKPLLNQ QQQQQQQKQH RLHPQPPPLL QLPAPVAQPS VPSATSVSAE EEMTGSSESG
301: SDGLDLGGMS GGVGGNGDEP EAKRRRRAER LGSSVVRSAT VLARTLVACE DRRERRHREV LELEERRLRL EAERNEVRRQ GFAGLVAAVN GLSGAIHALV
401: SDHHGRSGDS SR
001: MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.