Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G443100.1 | Wheat | plastid | 90.66 | 91.92 |
| TraesCS5D01G450500.1 | Wheat | plastid | 88.46 | 89.44 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 64.29 | 75.48 |
| KXG30289 | Sorghum | plastid | 59.34 | 61.89 |
| Zm00001d050583_P001 | Maize | plastid | 58.79 | 57.99 |
| Zm00001d016604_P001 | Maize | plastid | 57.42 | 57.1 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 44.51 | 46.55 |
| CDX85279 | Canola | cytosol | 29.4 | 44.21 |
| Solyc04g045430.2.1 | Tomato | nucleus | 35.99 | 41.85 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 39.01 | 41.76 |
| Bra005486.1-P | Field mustard | nucleus | 35.44 | 40.57 |
| CDY17185 | Canola | cytosol | 35.44 | 40.57 |
| AT2G33550.1 | Thale cress | cytosol | 34.89 | 40.45 |
| Os02t0516800-00 | Rice | nucleus | 49.45 | 40.36 |
| CDY27959 | Canola | cytosol | 34.89 | 40.06 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 35.16 | 40.0 |
| KRG93139 | Soybean | nucleus | 34.89 | 39.81 |
| KRH36366 | Soybean | nucleus | 35.44 | 39.69 |
| CDY23727 | Canola | cytosol | 34.07 | 39.62 |
| KRH01509 | Soybean | nucleus | 35.44 | 39.21 |
| CDY37710 | Canola | cytosol | 34.34 | 39.19 |
| KRH45200 | Soybean | nucleus | 34.89 | 38.96 |
| Bra021860.1-P | Field mustard | nucleus | 34.07 | 38.75 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 10.71 | 36.79 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 33.79 | 36.28 |
| PGSC0003DMT400087793 | Potato | nucleus | 30.22 | 35.71 |
| PGSC0003DMT400087461 | Potato | nucleus | 30.22 | 35.71 |
| Solyc01g065890.1.1 | Tomato | cytosol | 11.54 | 35.29 |
| PGSC0003DMT400087902 | Potato | nucleus | 22.53 | 32.41 |
| PGSC0003DMT400036757 | Potato | nucleus | 28.57 | 32.3 |
| Solyc03g118230.1.1 | Tomato | nucleus | 28.57 | 31.23 |
| Solyc01g065900.1.1 | Tomato | nucleus | 23.08 | 29.17 |
| KRH41057 | Soybean | nucleus | 26.37 | 28.92 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 23.08 | 27.81 |
| KRH59736 | Soybean | nucleus | 27.47 | 26.81 |
| TraesCS4B01G019200.1 | Wheat | nucleus | 17.31 | 19.03 |
| TraesCS2B01G579700.1 | Wheat | nucleus, plastid | 19.23 | 16.99 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G447700.1 | EnsemblPlantsGene:TraesCS5B01G447700 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil | PANTHER:PTHR33492 |
| PANTHER:PTHR33492:SF1 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:618475640..618476734
Molecular Weight (calculated)
39039.3 Da
IEP (calculated)
4.846
GRAVY (calculated)
-0.728
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAGDPAGA AAAAAPNPSV RAPRLPRWTR QEILVLIEGK RMVEVRGGVR GGRGRLAAAA AAGATGETAA AALEPKWAAV AEYCRRHGVE RGAVQCRKRW
101: SNLAGDWKKI KEWERAAAGA REPSFWAMRN DARRERRLPG FFDREVYGIL EGRGRGVVAG SSSGGGAAVE EVGVVRMEED DEEEETGEEE EERGKGKEVA
201: VAVAVKETVF DSGRPAGEEV LFSEDEEEED AETPEATPAP PPAVIALPIS ENSEASRQQS AQQGTTKGRQ GGHQGSTKTA GSPTLQQSGE KRQRTGDDGE
301: PRAEGIADKL LEILERNSQI MTAQLEAQNV NSERDREERR EQANSLAVVL GRLADALGRI ADKL
101: SNLAGDWKKI KEWERAAAGA REPSFWAMRN DARRERRLPG FFDREVYGIL EGRGRGVVAG SSSGGGAAVE EVGVVRMEED DEEEETGEEE EERGKGKEVA
201: VAVAVKETVF DSGRPAGEEV LFSEDEEEED AETPEATPAP PPAVIALPIS ENSEASRQQS AQQGTTKGRQ GGHQGSTKTA GSPTLQQSGE KRQRTGDDGE
301: PRAEGIADKL LEILERNSQI MTAQLEAQNV NSERDREERR EQANSLAVVL GRLADALGRI ADKL
001: MGETTKGDAT KPPPNQISSP KDSSLDHQAP NPSLLHHHHH HHQSFLPTPI FIPTVSSPGA PVIPKRPRFS TSSGLSPPQW KALPSPSTVP TASTISSSPT
101: PSTAVVTASS TETAGSSPPG QEATNSEKQQ QPKTESFQHK FRKGKYVSPV WKPNEMLWLA RAWRAQYQTQ GTGSGSGSVE GRGKTRAEKD REVAEYLNRH
201: GINRDSKIAG TKWDNMLGEF RKVYEWEKCG DQDKYGKSYF RLSPYERKQH RLPASFDEEV YQELALFMGP RVRAPTINRG GGGGATVTVA STPPSVEALP
301: PPLYPALMTS RDEYDIENNP IPSIGRGKRL ALSLVGDDHH PQYPYAHNIA RGSGLFSNKS LYNPFFEMIP SSSSSSSSLR DLRRIGKIRL TWEESVNLWA
401: EGEVDYGRIR VSGSSFLNAD ELTYLDDSMV ACTMESFQDG PLKGFSLDKF ISGQHLKVFG RQRSTSSSAP SPSVNVAGVF DRPQLQLSEP IYKSISTLEF
501: QDPSEHCLSK LRVPAGNLPS LFELARYLQE PPPENLRFPL RPDVYKDLPQ GKELFFSISS TELLDCRAIT YDIIGPIMSR LNSNNGFVIS SKDSLIPLWD
601: DCINRMVSKF CEMAILRKPD SSSCIENVQH QWPNVIGYVK GFGLWRGEEA DKVREGAADP SSLLAEKILW SYNDLPYILG YHAIGFTVTF CALSLSSQDR
701: VICTDLYSFN VSSPSDRIKA LVPCYRLASL LPLLADRCTT RPSCYNDFER IDRGDYVTEL TPHTVTRYYS SKRKWLGVKG IYDFLDQRVP HAEHLDMASE
801: KDLSLSFKPR GIRVKPRNID QLIDSLMCVT KALLALHDLS FMHRDMGWDN VMRSTATTTT TTDTDWFVCG FDAAVEAPQL NPHRPADKVV DNEEREDERG
901: RYAPEMERGL HAVKVDVWGV GYMIKTCGLS NVPKMLRDLQ GKCLEPNQEN RPTAADCFHH LLQVQSASTS SY
101: PSTAVVTASS TETAGSSPPG QEATNSEKQQ QPKTESFQHK FRKGKYVSPV WKPNEMLWLA RAWRAQYQTQ GTGSGSGSVE GRGKTRAEKD REVAEYLNRH
201: GINRDSKIAG TKWDNMLGEF RKVYEWEKCG DQDKYGKSYF RLSPYERKQH RLPASFDEEV YQELALFMGP RVRAPTINRG GGGGATVTVA STPPSVEALP
301: PPLYPALMTS RDEYDIENNP IPSIGRGKRL ALSLVGDDHH PQYPYAHNIA RGSGLFSNKS LYNPFFEMIP SSSSSSSSLR DLRRIGKIRL TWEESVNLWA
401: EGEVDYGRIR VSGSSFLNAD ELTYLDDSMV ACTMESFQDG PLKGFSLDKF ISGQHLKVFG RQRSTSSSAP SPSVNVAGVF DRPQLQLSEP IYKSISTLEF
501: QDPSEHCLSK LRVPAGNLPS LFELARYLQE PPPENLRFPL RPDVYKDLPQ GKELFFSISS TELLDCRAIT YDIIGPIMSR LNSNNGFVIS SKDSLIPLWD
601: DCINRMVSKF CEMAILRKPD SSSCIENVQH QWPNVIGYVK GFGLWRGEEA DKVREGAADP SSLLAEKILW SYNDLPYILG YHAIGFTVTF CALSLSSQDR
701: VICTDLYSFN VSSPSDRIKA LVPCYRLASL LPLLADRCTT RPSCYNDFER IDRGDYVTEL TPHTVTRYYS SKRKWLGVKG IYDFLDQRVP HAEHLDMASE
801: KDLSLSFKPR GIRVKPRNID QLIDSLMCVT KALLALHDLS FMHRDMGWDN VMRSTATTTT TTDTDWFVCG FDAAVEAPQL NPHRPADKVV DNEEREDERG
901: RYAPEMERGL HAVKVDVWGV GYMIKTCGLS NVPKMLRDLQ GKCLEPNQEN RPTAADCFHH LLQVQSASTS SY
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FLH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.