Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37710 | Canola | cytosol | 70.38 | 69.28 |
| CDY23727 | Canola | cytosol | 68.15 | 68.37 |
| CDX85279 | Canola | cytosol | 50.96 | 66.12 |
| Bra005486.1-P | Field mustard | nucleus | 66.88 | 66.04 |
| CDY17185 | Canola | cytosol | 66.88 | 66.04 |
| Bra021860.1-P | Field mustard | nucleus | 67.2 | 65.94 |
| CDY27959 | Canola | cytosol | 64.65 | 64.04 |
| Os04t0397500-00 | Rice | cytosol, nucleus | 12.1 | 58.46 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 45.86 | 42.48 |
| GSMUA_Achr10P... | Banana | nucleus | 44.59 | 41.18 |
| HORVU2Hr1G071100.8 | Barley | cytosol | 43.95 | 40.23 |
| KXG30289 | Sorghum | plastid | 43.95 | 39.54 |
| TraesCS2A01G287600.2 | Wheat | nucleus | 42.68 | 39.53 |
| Zm00001d025275_P001 | Maize | mitochondrion, nucleus | 41.08 | 38.62 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 42.68 | 38.51 |
| TraesCS2D01G286000.2 | Wheat | nucleus | 42.68 | 38.29 |
| Zm00001d016604_P001 | Maize | plastid | 44.27 | 37.98 |
| Zm00001d003889_P001 | Maize | nucleus | 41.72 | 37.54 |
| TraesCS5D01G450500.1 | Wheat | plastid | 42.36 | 36.94 |
| KXG26157 | Sorghum | nucleus | 42.04 | 36.67 |
| Zm00001d050583_P001 | Maize | plastid | 42.36 | 36.04 |
| PGSC0003DMT400036757 | Potato | nucleus | 36.31 | 35.4 |
| TraesCS5A01G443100.1 | Wheat | plastid | 40.45 | 35.38 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 35.67 | 35.0 |
| TraesCS5B01G447700.1 | Wheat | plastid | 40.45 | 34.89 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 34.39 | 34.84 |
| GSMUA_Achr6P16420_001 | Banana | golgi, nucleus, plastid | 24.2 | 34.08 |
| TraesCS3D01G434100.1 | Wheat | nucleus | 31.21 | 33.56 |
| Solyc03g118230.1.1 | Tomato | nucleus | 35.35 | 33.33 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 29.3 | 33.21 |
| TraesCS3A01G441300.1 | Wheat | nucleus | 30.89 | 32.66 |
| HORVU3Hr1G096240.1 | Barley | nucleus | 30.57 | 32.21 |
| KRH41057 | Soybean | nucleus | 32.8 | 31.02 |
| OQU88149 | Sorghum | nucleus | 29.62 | 31.0 |
| KRH59736 | Soybean | nucleus | 33.44 | 28.15 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 24.2 | 25.17 |
| Os02t0516800-00 | Rice | nucleus | 30.89 | 21.75 |
| AT2G35640.1 | Thale cress | nucleus | 19.43 | 17.94 |
| AT1G31310.1 | Thale cress | nucleus | 19.75 | 16.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | EntrezGene:817920 | UniProt:A0A178VNP1 | ProteinID:AAB80672.1 | ProteinID:AEC08851.1 |
| ArrayExpress:AT2G33550 | EnsemblPlantsGene:AT2G33550 | RefSeq:AT2G33550 | TAIR:AT2G33550 | RefSeq:AT2G33550-TAIR-G | EnsemblPlants:AT2G33550.1 |
| TAIR:AT2G33550.1 | EMBL:AY065364 | EMBL:AY096389 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0042803 | GO:GO:0045892 | GO:GO:0050777 | GO:GO:0071219 | EMBL:HQ322383 |
| InterPro:IPR017877 | InterPro:Myb-like_dom | RefSeq:NP_850213.1 | ProteinID:OAP07348.1 | PFAM:PF13837 | PO:PO:0000293 |
| PFscan:PS50090 | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF51 | UniProt:Q8VZ20 | UniParc:UPI00000A622F | SEG:seg |
Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
Coordinates
chr2:-:14209982..14211693
Molecular Weight (calculated)
34863.2 Da
IEP (calculated)
6.042
GRAVY (calculated)
-0.787
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.