Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra023252.1-P | |
| Bra035511.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G33550.1 | Bra023252.1-P | AT1G32230.1 | 19548978 |
| AT2G33550.1 | Bra035511.1-P | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23727 | Canola | cytosol | 86.88 | 88.82 |
| AT2G33550.1 | Thale cress | cytosol | 65.94 | 67.2 |
| Bra005486.1-P | Field mustard | nucleus | 65.62 | 66.04 |
| Os04t0397500-00 | Rice | cytosol, nucleus | 10.62 | 52.31 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 44.06 | 41.59 |
| GSMUA_Achr10P... | Banana | nucleus | 42.5 | 40.0 |
| KXG30289 | Sorghum | plastid | 40.31 | 36.96 |
| Zm00001d025275_P001 | Maize | mitochondrion, nucleus | 38.44 | 36.83 |
| TraesCS2A01G287600.2 | Wheat | nucleus | 38.75 | 36.58 |
| HORVU2Hr1G071100.8 | Barley | cytosol | 38.44 | 35.86 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 30.94 | 35.74 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 38.75 | 35.63 |
| KXG26157 | Sorghum | nucleus | 40.0 | 35.56 |
| TraesCS2D01G286000.2 | Wheat | nucleus | 38.75 | 35.43 |
| Zm00001d016604_P001 | Maize | plastid | 40.31 | 35.25 |
| Zm00001d050583_P001 | Maize | plastid | 40.31 | 34.96 |
| Zm00001d003889_P001 | Maize | nucleus | 38.12 | 34.96 |
| TraesCS5D01G450500.1 | Wheat | plastid | 39.06 | 34.72 |
| PGSC0003DMT400036757 | Potato | nucleus | 34.69 | 34.47 |
| TraesCS5B01G447700.1 | Wheat | plastid | 38.75 | 34.07 |
| TraesCS5A01G443100.1 | Wheat | plastid | 38.12 | 33.98 |
| Solyc03g118230.1.1 | Tomato | nucleus | 34.69 | 33.33 |
| TraesCS3D01G434100.1 | Wheat | nucleus | 30.31 | 33.22 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 32.81 | 32.81 |
| TraesCS3A01G441300.1 | Wheat | nucleus | 30.31 | 32.66 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 31.56 | 32.58 |
| HORVU3Hr1G096240.1 | Barley | nucleus | 30.31 | 32.55 |
| OQU88149 | Sorghum | nucleus | 30.31 | 32.33 |
| KRH41057 | Soybean | nucleus | 33.44 | 32.23 |
| KRH59736 | Soybean | nucleus | 33.75 | 28.95 |
| GSMUA_Achr6P16420_001 | Banana | golgi, nucleus, plastid | 20.0 | 28.7 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 23.75 | 25.17 |
| Os02t0516800-00 | Rice | nucleus | 30.0 | 21.52 |
| Bra014906.1-P | Field mustard | nucleus | 18.44 | 15.29 |
| Bra023175.1-P | Field mustard | nucleus | 18.12 | 14.99 |
Protein Annotations
| EnsemblPlants:Bra021860.1 | EnsemblPlants:Bra021860.1-P | EnsemblPlantsGene:Bra021860 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF51 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| UniParc:UPI00025436DB | UniProt:M4DZB3 | MapMan:35.1 | : | : | : |
Description
AT2G33550 (E=5e-113) | gt-2-related
Coordinates
chrA04:-:14915384..14916713
Molecular Weight (calculated)
35111.2 Da
IEP (calculated)
5.650
GRAVY (calculated)
-0.791
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEQQLGLA VTAVDGDGNG NGNGGGGENS APSNEGGDDS VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCRRHGVN
101: RGPVQCRKRW SNLAGDYKKI KEWESQVKEE TESYWVMRND VRRERKLPGF FDKEVYDVVD GGVVPPALAL GLAPAATSTS VEPEGVLSEL ERREPAPNKL
201: LQDVIDKEKQ AACGVDDQGR VKEKDAEAAN PEAGSTSQEA RKRKRTSVSE DEEKEEEATK SMDNQLIQIL ERNGQLLAAQ LEVQNTNLKL DREQRKDHGD
301: NLVAVLSKLA DAVAKIADKL
101: RGPVQCRKRW SNLAGDYKKI KEWESQVKEE TESYWVMRND VRRERKLPGF FDKEVYDVVD GGVVPPALAL GLAPAATSTS VEPEGVLSEL ERREPAPNKL
201: LQDVIDKEKQ AACGVDDQGR VKEKDAEAAN PEAGSTSQEA RKRKRTSVSE DEEKEEEATK SMDNQLIQIL ERNGQLLAAQ LEVQNTNLKL DREQRKDHGD
301: NLVAVLSKLA DAVAKIADKL
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.