Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P16420_001 | Banana | golgi, nucleus, plastid | 40.88 | 62.33 |
| CDX85279 | Canola | cytosol | 34.71 | 48.76 |
| KRG93139 | Soybean | nucleus | 45.59 | 48.59 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 48.24 | 48.24 |
| KRH36366 | Soybean | nucleus | 45.88 | 48.0 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 44.71 | 47.5 |
| CDY27959 | Canola | cytosol | 42.35 | 45.43 |
| KRH01509 | Soybean | nucleus | 43.82 | 45.29 |
| Bra005486.1-P | Field mustard | nucleus | 42.35 | 45.28 |
| CDY17185 | Canola | cytosol | 42.35 | 45.28 |
| KRH45200 | Soybean | nucleus | 43.24 | 45.09 |
| AT2G33550.1 | Thale cress | cytosol | 41.18 | 44.59 |
| Solyc04g045430.2.1 | Tomato | nucleus | 40.88 | 44.41 |
| CDY23727 | Canola | cytosol | 40.29 | 43.77 |
| CDY37710 | Canola | cytosol | 40.88 | 43.57 |
| Bra021860.1-P | Field mustard | nucleus | 40.0 | 42.5 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 42.35 | 42.48 |
| Solyc01g065890.1.1 | Tomato | cytosol | 14.12 | 40.34 |
| PGSC0003DMT400087793 | Potato | nucleus | 36.47 | 40.26 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 12.35 | 39.62 |
| PGSC0003DMT400087461 | Potato | nucleus | 35.88 | 39.61 |
| PGSC0003DMT400036757 | Potato | nucleus | 33.24 | 35.09 |
| PGSC0003DMT400087902 | Potato | nucleus | 25.88 | 34.78 |
| Solyc03g118230.1.1 | Tomato | nucleus | 32.35 | 33.03 |
| Solyc01g065900.1.1 | Tomato | nucleus | 27.35 | 32.29 |
| KRH41057 | Soybean | nucleus | 31.18 | 31.93 |
| KRH59736 | Soybean | nucleus | 32.35 | 29.49 |
| GSMUA_Achr4P32040_001 | Banana | nucleus | 18.53 | 18.48 |
| GSMUA_Achr5P02140_001 | Banana | nucleus | 16.47 | 17.95 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 20.88 | 16.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P12120_001 | EnsemblPlants:GSMUA_Achr10T12120_001 | EnsemblPlantsGene:GSMUA_Achr10G12120_001 | Gene3D:1.10.10.60 | ncoils:Coil | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF51 | PFAM:PF13837 | SEG:seg | UniParc:UPI000294815A | UniProt:M0RHI8 | MapMan:35.1 |
Description
transcription factor, putative [Source:GMGC_GENE;Acc:GSMUA_Achr10G12120_001]
Coordinates
chr10:-:21249561..21251566
Molecular Weight (calculated)
36727.5 Da
IEP (calculated)
4.808
GRAVY (calculated)
-0.891
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAVDTAGS NGDDGAGGGG GGGARPPRLP RWTRQEILVL IQGKRVVESR GRGRGAGRGG GGSGEMGAGA LVAAASPVEP KWASVSSYCR RHGVDRGPVQ
101: CRKRWSNLAG DFKKIKEWEA KGKESFWTMR NDLRRERRLP GFFDREVYDI LDGVAVAEVE AEPAAEEEEE GKKGLGRTAA AGGEEEEAVF DSGRTAAEDG
201: LFSDFEEEKE AEDEDEDTAP PPQPVAAVPI SEKKCESSQH WRSDEATAKD KPQAENPGKS SPSQGGQKRR RTSPDEAEDS DLQSRLIEVL ERNSRMLTAQ
301: LEAQNMNCQL DRDQRKDQAN GLLAVLGKLA DALGRIADKL
101: CRKRWSNLAG DFKKIKEWEA KGKESFWTMR NDLRRERRLP GFFDREVYDI LDGVAVAEVE AEPAAEEEEE GKKGLGRTAA AGGEEEEAVF DSGRTAAEDG
201: LFSDFEEEKE AEDEDEDTAP PPQPVAAVPI SEKKCESSQH WRSDEATAKD KPQAENPGKS SPSQGGQKRR RTSPDEAEDS DLQSRLIEVL ERNSRMLTAQ
301: LEAQNMNCQL DRDQRKDQAN GLLAVLGKLA DALGRIADKL
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.