Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400087793 | Potato | nucleus | 90.91 | 90.91 |
| PGSC0003DMT400087902 | Potato | nucleus | 62.66 | 76.28 |
| Solyc01g065900.1.1 | Tomato | nucleus | 62.01 | 66.32 |
| Solyc01g065890.1.1 | Tomato | cytosol | 22.08 | 57.14 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 18.18 | 52.83 |
| Os04t0397500-00 | Rice | cytosol, nucleus | 10.71 | 50.77 |
| KRH36366 | Soybean | nucleus | 45.45 | 43.08 |
| KRG93139 | Soybean | nucleus | 44.48 | 42.95 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 46.1 | 41.76 |
| KRH01509 | Soybean | nucleus | 40.91 | 38.3 |
| KRH45200 | Soybean | nucleus | 39.29 | 37.12 |
| GSMUA_Achr10P... | Banana | nucleus | 39.61 | 35.88 |
| TraesCS2A01G287600.2 | Wheat | nucleus | 38.96 | 35.4 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 38.96 | 34.48 |
| HORVU2Hr1G071100.8 | Barley | cytosol | 38.31 | 34.4 |
| TraesCS2D01G286000.2 | Wheat | nucleus | 38.64 | 34.0 |
| Zm00001d025275_P001 | Maize | mitochondrion, nucleus | 36.69 | 33.83 |
| Zm00001d003889_P001 | Maize | nucleus | 37.66 | 33.24 |
| KXG30289 | Sorghum | plastid | 36.36 | 32.09 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 32.79 | 31.56 |
| KXG26157 | Sorghum | nucleus | 36.04 | 30.83 |
| Zm00001d016604_P001 | Maize | plastid | 36.36 | 30.6 |
| TraesCS5D01G450500.1 | Wheat | plastid | 35.71 | 30.56 |
| PGSC0003DMT400036757 | Potato | nucleus | 31.82 | 30.43 |
| TraesCS5B01G447700.1 | Wheat | plastid | 35.71 | 30.22 |
| TraesCS5A01G443100.1 | Wheat | plastid | 35.06 | 30.08 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 30.19 | 30.0 |
| Zm00001d050583_P001 | Maize | plastid | 35.06 | 29.27 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 25.97 | 28.88 |
| TraesCS3D01G434100.1 | Wheat | nucleus | 26.62 | 28.08 |
| HORVU3Hr1G096240.1 | Barley | nucleus | 26.95 | 27.85 |
| TraesCS3A01G441300.1 | Wheat | nucleus | 26.62 | 27.61 |
| GSMUA_Achr6P16420_001 | Banana | golgi, nucleus, plastid | 19.81 | 27.35 |
| OQU88149 | Sorghum | nucleus | 25.65 | 26.33 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 20.45 | 20.86 |
| Os02t0516800-00 | Rice | nucleus | 27.92 | 19.28 |
| PGSC0003DMT400054486 | Potato | nucleus | 6.49 | 15.5 |
| PGSC0003DMT400033627 | Potato | nucleus | 16.88 | 15.38 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400087461 | EnsemblPlantsGene:PGSC0003DMG400037032 | EntrezGene:107061830 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF51 | PFAM:PF13837 | PFscan:PS50090 | PGSC:PGSC0003DMG400037032 |
| RefSeq:XP_015167214.1 | SEG:seg | UniParc:UPI0002949AD8 | UniProt:M1DDW2 | MapMan:35.1 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400037032]
Coordinates
chr1:-:11102594..11103520
Molecular Weight (calculated)
34769.4 Da
IEP (calculated)
9.837
GRAVY (calculated)
-0.780
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKSNNLKQ LILIPSTDSD GRQQSINGVN DANKVSRLPP WTKQEILILI QGKKVIEDRF HRALTGGMEL GSIQVEAKWD SVSSYCKRQG VNRGPIQCQK
101: RWSNLAGVFK KIKEWESQIK EEKESFWMMR NDFKREKKLP GFFDRQVFDI LDHGNGNEEG LDLASTSEVL FNSGRSVVVG DDGLFSDVPQ MNEDAIPMLT
201: LKEPDQPLSQ VSPTQAGVRQ TTTPGADKGR GQEGRKRKRN DSNDEKIRNV QHHLVKVLER NGKMVSSQLE AQNMHSEKDR EQRKDHVDNL VVVLNKLAGA
301: LGRIADKL
101: RWSNLAGVFK KIKEWESQIK EEKESFWMMR NDFKREKKLP GFFDRQVFDI LDHGNGNEEG LDLASTSEVL FNSGRSVVVG DDGLFSDVPQ MNEDAIPMLT
201: LKEPDQPLSQ VSPTQAGVRQ TTTPGADKGR GQEGRKRKRN DSNDEKIRNV QHHLVKVLER NGKMVSSQLE AQNMHSEKDR EQRKDHVDNL VVVLNKLAGA
301: LGRIADKL
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.