Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G33550.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT2G33550.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT2G33550.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G434100.1 | Wheat | nucleus | 85.91 | 87.67 |
| TraesCS3A01G441300.1 | Wheat | nucleus | 80.54 | 80.81 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 63.09 | 62.25 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 46.64 | 50.18 |
| OQU88149 | Sorghum | nucleus | 46.31 | 46.0 |
| CDX85279 | Canola | cytosol | 26.17 | 32.23 |
| CDY23727 | Canola | cytosol | 32.89 | 31.31 |
| Solyc04g045430.2.1 | Tomato | nucleus | 32.89 | 31.31 |
| CDY37710 | Canola | cytosol | 33.22 | 31.03 |
| CDY27959 | Canola | cytosol | 32.89 | 30.91 |
| Bra005486.1-P | Field mustard | nucleus | 32.89 | 30.82 |
| CDY17185 | Canola | cytosol | 32.89 | 30.82 |
| AT2G33550.1 | Thale cress | cytosol | 32.21 | 30.57 |
| KRH36366 | Soybean | nucleus | 33.22 | 30.46 |
| Bra021860.1-P | Field mustard | nucleus | 32.55 | 30.31 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 33.89 | 29.71 |
| KRG93139 | Soybean | nucleus | 31.54 | 29.47 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 10.07 | 28.3 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 31.88 | 28.02 |
| HORVU2Hr1G071100.8 | Barley | cytosol | 31.88 | 27.7 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 28.52 | 27.42 |
| KRH01509 | Soybean | nucleus | 30.2 | 27.36 |
| KRH45200 | Soybean | nucleus | 29.87 | 27.3 |
| PGSC0003DMT400087793 | Potato | nucleus | 28.19 | 27.27 |
| PGSC0003DMT400087461 | Potato | nucleus | 27.85 | 26.95 |
| Solyc01g065890.1.1 | Tomato | cytosol | 10.74 | 26.89 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 28.52 | 26.56 |
| PGSC0003DMT400036757 | Potato | nucleus | 27.85 | 25.78 |
| PGSC0003DMT400087902 | Potato | nucleus | 21.14 | 24.9 |
| Solyc03g118230.1.1 | Tomato | nucleus | 27.18 | 24.32 |
| Solyc01g065900.1.1 | Tomato | nucleus | 21.48 | 22.22 |
| KRH41057 | Soybean | nucleus | 24.16 | 21.69 |
| KRH59736 | Soybean | nucleus | 24.83 | 19.84 |
| HORVU4Hr1G002970.1 | Barley | nucleus | 19.8 | 17.72 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G096240.1 | EnsemblPlantsGene:HORVU3Hr1G096240 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:Myb-like_dom | PANTHER:PTHR33492 | PANTHER:PTHR33492:SF1 |
| PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SUPFAM:SSF46689 | UniParc:UPI00029575FA | UniProt:M0XP67 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:652428291..652429526
Molecular Weight (calculated)
32557.0 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.697
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSANGDSPA GAAVTTPRSR LPRWTRHETL VLIQAKRVTE QRAAQPVRLK WAVVSAYCRR HGVERGPMQC RKRWGNLSWD LKKIVAWEKK HAAALAAGDA
101: DSTAPERESF WDMRGEQRRA RQLPSSFDRE VYDAIVGAGA ANQLRPDSAE EMELADDADE HPPSPMMVMP IQARMYVPPA SSQSQHECSD PATESAKKPA
201: SDKNSTSQQD SEATFGAGVG AEDTDTATAT ATATPTAEAG TTSMGRQVTE ALERGNRLLA EQLEAQRANW DADREHRRAL LAAVNKLADA AARIAERL
101: DSTAPERESF WDMRGEQRRA RQLPSSFDRE VYDAIVGAGA ANQLRPDSAE EMELADDADE HPPSPMMVMP IQARMYVPPA SSQSQHECSD PATESAKKPA
201: SDKNSTSQQD SEATFGAGVG AEDTDTATAT ATATPTAEAG TTSMGRQVTE ALERGNRLLA EQLEAQRANW DADREHRRAL LAAVNKLADA AARIAERL
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.