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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 5
  • cytosol 1
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g065890.1.1 Tomato cytosol 39.62 35.29
PGSC0003DMT400087902 Potato nucleus 50.94 21.34
Solyc01g065900.1.1 Tomato nucleus 53.77 19.79
PGSC0003DMT400087793 Potato nucleus 53.77 18.51
PGSC0003DMT400087461 Potato nucleus 52.83 18.18
Solyc04g045430.2.1 Tomato nucleus 44.34 15.02
VIT_01s0150g00050.t01 Wine grape nucleus 40.57 12.65
KRH36366 Soybean nucleus 38.68 12.62
GSMUA_Achr10P... Banana nucleus 39.62 12.35
KRG93139 Soybean nucleus 36.79 12.23
TraesCS2A01G287600.2 Wheat nucleus 37.74 11.8
Zm00001d025275_P001 Maize mitochondrion, nucleus 36.79 11.68
HORVU2Hr1G071100.8 Barley cytosol 37.74 11.66
KRH45200 Soybean nucleus 35.85 11.66
HORVU5Hr1G106480.1 Barley cytosol, nucleus 33.96 11.61
KRH01509 Soybean nucleus 35.85 11.55
TraesCS2B01G304400.1 Wheat nucleus 37.74 11.49
KXG30289 Sorghum plastid 37.74 11.46
TraesCS2D01G286000.2 Wheat nucleus 37.74 11.43
GSMUA_Achr8P00510_001 Banana nucleus 33.96 11.25
Zm00001d016604_P001 Maize plastid 38.68 11.2
KXG26157 Sorghum nucleus 37.74 11.11
Zm00001d003889_P001 Maize nucleus 35.85 10.89
TraesCS5A01G443100.1 Wheat plastid 36.79 10.86
TraesCS5D01G450500.1 Wheat plastid 36.79 10.83
Zm00001d042271_P001 Maize nucleus, plastid 28.3 10.83
TraesCS5B01G447700.1 Wheat plastid 36.79 10.71
Zm00001d050583_P001 Maize plastid 35.85 10.3
TraesCS3D01G434100.1 Wheat nucleus 28.3 10.27
HORVU3Hr1G096240.1 Barley nucleus 28.3 10.07
TraesCS3B01G475300.1 Wheat nucleus, plastid 28.3 9.93
Solyc03g118230.1.1 Tomato nucleus 31.13 9.91
TraesCS3A01G441300.1 Wheat nucleus 27.36 9.76
OQU88149 Sorghum nucleus 27.36 9.67
Os02t0516800-00 Rice nucleus 37.74 8.97
Solyc02g069390.1.1 Tomato nucleus 24.53 8.5
GSMUA_Achr6P16420_001 Banana golgi, nucleus, plastid 15.09 7.17
Solyc02g030460.2.1 Tomato nucleus 20.75 6.51
Os04t0397500-00 Rice cytosol, nucleus 0.94 1.54
Protein Annotations
EnsemblPlants:Solyc09g015150.1.1EnsemblPlantsGene:Solyc09g015150.1PANTHER:PTHR33492PANTHER:PTHR33492:SF3UniParc:UPI000276BD14UniProt:K4CRY7
MapMan:35.1:::::
Description
No Description!
Coordinates
chr9:-:8084460..8084849
Molecular Weight (calculated)
12859.3 Da
IEP (calculated)
9.351
GRAVY (calculated)
-1.025
Length
106 amino acids
Sequence
(BLAST)
001: MDNLSITSMM QTQCRGSLVR PNKKSHSHTK VVEDRIHRPR TEGVNHGSIQ FQRRWSDLAR DFEKIKEWES HDKEEIESFW MMRNDFKREK NLPGFFIRQV
101: FDILDH
Best Arabidopsis Sequence Match ( AT2G33550.1 )
(BLAST)
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.