Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G33550.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT2G33550.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT2G33550.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30289 | Sorghum | plastid | 77.05 | 80.8 |
| Zm00001d050583_P001 | Maize | plastid | 66.94 | 66.4 |
| TraesCS5D01G450500.1 | Wheat | plastid | 58.74 | 59.72 |
| TraesCS5A01G443100.1 | Wheat | plastid | 56.56 | 57.66 |
| TraesCS5B01G447700.1 | Wheat | plastid | 57.1 | 57.42 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 46.45 | 54.84 |
| Zm00001d025275_P001 | Maize | mitochondrion, nucleus | 46.45 | 50.9 |
| Zm00001d003889_P001 | Maize | nucleus | 47.81 | 50.14 |
| CDX85279 | Canola | cytosol | 32.24 | 48.76 |
| Bra005486.1-P | Field mustard | nucleus | 38.52 | 44.34 |
| CDY17185 | Canola | cytosol | 38.52 | 44.34 |
| KRH36366 | Soybean | nucleus | 39.34 | 44.31 |
| AT2G33550.1 | Thale cress | cytosol | 37.98 | 44.27 |
| CDY27959 | Canola | cytosol | 38.25 | 44.16 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 40.71 | 43.82 |
| KRH01509 | Soybean | nucleus | 39.34 | 43.77 |
| KRG93139 | Soybean | nucleus | 37.98 | 43.57 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 37.98 | 43.44 |
| KRH45200 | Soybean | nucleus | 38.25 | 42.94 |
| Solyc04g045430.2.1 | Tomato | nucleus | 36.07 | 42.17 |
| CDY37710 | Canola | cytosol | 35.79 | 41.07 |
| CDY23727 | Canola | cytosol | 34.7 | 40.58 |
| Bra021860.1-P | Field mustard | nucleus | 35.25 | 40.31 |
| Os02t0516800-00 | Rice | nucleus | 47.54 | 39.01 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 11.2 | 38.68 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 27.87 | 36.82 |
| PGSC0003DMT400087793 | Potato | nucleus | 30.87 | 36.69 |
| VIT_17s0000g00270.t01 | Wine grape | nucleus | 33.88 | 36.58 |
| PGSC0003DMT400087461 | Potato | nucleus | 30.6 | 36.36 |
| Solyc01g065890.1.1 | Tomato | cytosol | 11.75 | 36.13 |
| PGSC0003DMT400087902 | Potato | nucleus | 22.68 | 32.81 |
| Solyc03g118230.1.1 | Tomato | nucleus | 28.42 | 31.23 |
| PGSC0003DMT400036757 | Potato | nucleus | 27.05 | 30.75 |
| KRH41057 | Soybean | nucleus | 27.32 | 30.12 |
| Solyc01g065900.1.1 | Tomato | nucleus | 22.95 | 29.17 |
| KRH59736 | Soybean | nucleus | 29.51 | 28.95 |
| Zm00001d034953_P001 | Maize | nucleus | 15.03 | 26.96 |
| Zm00001d001894_P001 | Maize | mitochondrion | 20.49 | 19.68 |
| Zm00001d013588_P001 | Maize | nucleus | 18.58 | 18.89 |
Protein Annotations
| EnsemblPlants:Zm00001d016604_P001 | EnsemblPlants:Zm00001d016604_T001 | EnsemblPlantsGene:Zm00001d016604 | EntrezGene:103627203 | ncoils:Coil | PANTHER:PTHR33492 |
| PANTHER:PTHR33492:SF1 | PFAM:PF13837 | ProteinID:AQK71255.1 | SEG:seg | UniParc:UPI0002219749 | UniProt:A0A1D6H961 |
| MapMan:35.1 | : | : | : | : | : |
Description
Trihelix transcription factor ASR3
Coordinates
chr5:-:169748008..169751725
Molecular Weight (calculated)
38954.1 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.589
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAGDPAGA AAAAAAAAAA AAAAPAPSGR APRLPRWTRQ EILVLIEGKR MVEGRGGRAG RGRLAAAAAA AAAAASGEAS ATAAAAAALE PKWAAVAEYC
101: RRHGVERGPV QCRKRWSNLA GDYKKIKEWE RAAPAERDPS FWAMRNDARR ERRLPGFFDR EVYDILEGRA RPVLDDRAAR NAAAAEEAVA VAVAVHVEEE
201: DREAEVPEAV FDSGRPATEE ALFSEDEEEE EVEDAPAVAP PPPAPSVVAV PVSEKPEASR HQQSAEQGTS KDTQPEQSSE RDAPAEQGGQ KRPRTDEAAG
301: EGEGTAYLQS KLIEILDRNS RLVAAQLEAQ NQNCELDREQ RNDQANSLVL VLGRLADALG RIADKL
101: RRHGVERGPV QCRKRWSNLA GDYKKIKEWE RAAPAERDPS FWAMRNDARR ERRLPGFFDR EVYDILEGRA RPVLDDRAAR NAAAAEEAVA VAVAVHVEEE
201: DREAEVPEAV FDSGRPATEE ALFSEDEEEE EVEDAPAVAP PPPAPSVVAV PVSEKPEASR HQQSAEQGTS KDTQPEQSSE RDAPAEQGGQ KRPRTDEAAG
301: EGEGTAYLQS KLIEILDRNS RLVAAQLEAQ NQNCELDREQ RNDQANSLVL VLGRLADALG RIADKL
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.