Factsheet for GSMUA_Achr8P00510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr2P18060_001
GSMUA_Achr4P19000_001
GSMUA_Achr5P14120_001
GSMUA_Achr8P14660_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33550.1	GSMUA_Achr11P...	AT1G32230.1	19548978
AT2G33550.1	GSMUA_Achr2P18060_001	AT1G32230.1	19548978
AT2G33550.1	GSMUA_Achr4P19000_001	AT1G32230.1	19548978
AT2G33550.1	GSMUA_Achr5P14120_001	AT1G32230.1	19548978
AT2G33550.1	GSMUA_Achr8P14660_001	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0397500-00	Rice	cytosol, nucleus	9.38	46.15
GSMUA_Achr10P...	Banana	nucleus	47.5	44.71
Zm00001d025275_P001	Maize	mitochondrion, nucleus	41.56	39.82
GSMUA_Achr6P16420_001	Banana	golgi, nucleus, plastid	27.19	39.01
VIT_01s0150g00050.t01	Wine grape	nucleus	41.25	38.82
KXG30289	Sorghum	plastid	41.88	38.4
Zm00001d016604_P001	Maize	plastid	43.44	37.98
TraesCS2A01G287600.2	Wheat	nucleus	40.0	37.76
Zm00001d003889_P001	Maize	nucleus	40.62	37.25
KXG26157	Sorghum	nucleus	41.88	37.22
TraesCS5D01G450500.1	Wheat	plastid	41.88	37.22
TraesCS2B01G304400.1	Wheat	nucleus	40.31	37.07
KRG93139	Soybean	nucleus	36.56	36.68
VIT_17s0000g00270.t01	Wine grape	nucleus	38.75	36.58
HORVU2Hr1G071100.8	Barley	cytosol	39.06	36.44
CDX85279	Canola	cytosol	27.5	36.36
TraesCS2D01G286000.2	Wheat	nucleus	39.69	36.29
TraesCS5A01G443100.1	Wheat	plastid	40.31	35.93
AT2G33550.1	Thale cress	cytosol	35.0	35.67
KRH36366	Soybean	nucleus	35.94	35.38
TraesCS5B01G447700.1	Wheat	plastid	40.0	35.16
HORVU5Hr1G106480.1	Barley	cytosol, nucleus	34.06	35.16
Zm00001d050583_P001	Maize	plastid	40.31	34.96
PGSC0003DMT400087793	Potato	nucleus	33.12	34.42
CDY23727	Canola	cytosol	33.44	34.19
Bra005486.1-P	Field mustard	nucleus	33.75	33.96
CDY17185	Canola	cytosol	33.75	33.96
Solyc09g015150.1.1	Tomato	nucleus, plastid	11.25	33.96
CDY37710	Canola	cytosol	33.75	33.86
CDY27959	Canola	cytosol	33.44	33.75
KRH01509	Soybean	nucleus	34.69	33.74
KRH45200	Soybean	nucleus	34.06	33.44
Solyc04g045430.2.1	Tomato	nucleus	32.19	32.91
Bra021860.1-P	Field mustard	nucleus	32.81	32.81
PGSC0003DMT400087461	Potato	nucleus	31.56	32.79
Zm00001d042271_P001	Maize	nucleus, plastid	27.19	31.41
TraesCS3D01G434100.1	Wheat	nucleus	26.88	29.45
Solyc01g065890.1.1	Tomato	cytosol	10.94	29.41
TraesCS3A01G441300.1	Wheat	nucleus	27.19	29.29
PGSC0003DMT400087902	Potato	nucleus	22.81	28.85
OQU88149	Sorghum	nucleus	26.88	28.67
PGSC0003DMT400036757	Potato	nucleus	28.75	28.57
HORVU3Hr1G096240.1	Barley	nucleus	26.56	28.52
Solyc01g065900.1.1	Tomato	nucleus	25.31	28.12
Solyc03g118230.1.1	Tomato	nucleus	28.12	27.03
KRH41057	Soybean	nucleus	25.0	24.1
TraesCS3B01G475300.1	Wheat	nucleus, plastid	22.19	23.51
Os02t0516800-00	Rice	nucleus	32.19	23.09
KRH59736	Soybean	nucleus	26.56	22.79
GSMUA_Achr5P02140_001	Banana	nucleus	16.88	17.31
GSMUA_Achr4P32040_001	Banana	nucleus	17.5	16.42
GSMUA_AchrUn_...	Banana	nucleus, plastid	20.0	14.99

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607
GO:GO:0009987	GO:GO:0042803	GO:GO:0045892	GO:GO:0050777	GO:GO:0071219	EnsemblPlantsGene:GSMUA_Achr8G00510_001
EnsemblPlants:GSMUA_Achr8P00510_001	EnsemblPlants:GSMUA_Achr8T00510_001	InterPro:IPR017877	UniProt:M0TLF3	InterPro:Myb-like_dom	PFAM:PF13837
PFscan:PS50090	PANTHER:PTHR21654	PANTHER:PTHR21654:SF51	UniParc:UPI0002965C26	SEG:seg	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G00510_001]

Coordinates

chr8:+:428631..432987

Molecular Weight (calculated)

36038.8 Da

IEP (calculated)

4.809

GRAVY (calculated)

-0.941

Length

320 amino acids

Sequence
(BLAST)

001: MADGVNGGGG GDGGSASRPH RLPRWTRREI MVLVEAKRAA EGRGRGARGP RSAAGETKWE WVSAYCRRKG VDRGMLQCRK RWSNLACDFK KVRAWEGGEG
101: AAAGESFWAM RNDCRRDRRL PGFFDKEVFD ILNRTVLNEL EAEEEEEEAE VKVRDGGEGE NEKEEDEVEV EEEEAVFDSG RTAADNGLFS DCEYENGMGG
201: QERLPPPIAV TPISERKFEP FQQEFSDPGI INDRQPANDH ETQSSQGLKR RRISPEEGSS NFDNQLIKII ERNNKMIVSH FNAQNANLQL ERDQRREQAN
301: SLLDVLNKLV DAVGRIADKL

Best Arabidopsis Sequence Match ( AT2G33550.1 )
(BLAST)

001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM

Arabidopsis Description

ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.