Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93139 | Soybean | nucleus | 52.08 | 51.1 |
| Os04t0397500-00 | Rice | cytosol, nucleus | 10.54 | 50.77 |
| KRH36366 | Soybean | nucleus | 52.08 | 50.15 |
| Solyc01g065900.1.1 | Tomato | nucleus | 45.37 | 49.31 |
| VIT_01s0150g00050.t01 | Wine grape | nucleus | 52.72 | 48.53 |
| Solyc01g065890.1.1 | Tomato | cytosol | 17.57 | 46.22 |
| Solyc09g015150.1.1 | Tomato | nucleus, plastid | 15.02 | 44.34 |
| KRH01509 | Soybean | nucleus | 45.37 | 43.16 |
| KRH45200 | Soybean | nucleus | 44.73 | 42.94 |
| GSMUA_Achr10P... | Banana | nucleus | 44.41 | 40.88 |
| KXG30289 | Sorghum | plastid | 42.81 | 38.4 |
| TraesCS2A01G287600.2 | Wheat | nucleus | 41.53 | 38.35 |
| TraesCS2B01G304400.1 | Wheat | nucleus | 42.49 | 38.22 |
| HORVU2Hr1G071100.8 | Barley | cytosol | 41.53 | 37.9 |
| Zm00001d025275_P001 | Maize | mitochondrion, nucleus | 39.94 | 37.43 |
| TraesCS2D01G286000.2 | Wheat | nucleus | 41.21 | 36.86 |
| TraesCS5A01G443100.1 | Wheat | plastid | 42.17 | 36.77 |
| HORVU5Hr1G106480.1 | Barley | cytosol, nucleus | 35.78 | 36.13 |
| Zm00001d016604_P001 | Maize | plastid | 42.17 | 36.07 |
| Zm00001d050583_P001 | Maize | plastid | 42.49 | 36.04 |
| TraesCS5B01G447700.1 | Wheat | plastid | 41.85 | 35.99 |
| TraesCS5D01G450500.1 | Wheat | plastid | 41.21 | 35.83 |
| Zm00001d003889_P001 | Maize | nucleus | 39.62 | 35.53 |
| Zm00001d042271_P001 | Maize | nucleus, plastid | 30.99 | 35.02 |
| KXG26157 | Sorghum | nucleus | 39.94 | 34.72 |
| TraesCS3D01G434100.1 | Wheat | nucleus | 31.95 | 34.25 |
| TraesCS3A01G441300.1 | Wheat | nucleus | 32.27 | 34.01 |
| HORVU3Hr1G096240.1 | Barley | nucleus | 31.31 | 32.89 |
| GSMUA_Achr8P00510_001 | Banana | nucleus | 32.91 | 32.19 |
| Solyc03g118230.1.1 | Tomato | nucleus | 34.19 | 32.13 |
| OQU88149 | Sorghum | nucleus | 30.35 | 31.67 |
| GSMUA_Achr6P16420_001 | Banana | golgi, nucleus, plastid | 21.41 | 30.04 |
| TraesCS3B01G475300.1 | Wheat | nucleus, plastid | 25.56 | 26.49 |
| Os02t0516800-00 | Rice | nucleus | 32.59 | 22.87 |
| Solyc02g069390.1.1 | Tomato | nucleus | 18.21 | 18.63 |
| Solyc02g030460.2.1 | Tomato | nucleus | 19.17 | 17.75 |
Protein Annotations
| EnsemblPlants:Solyc04g045430.2.1 | EnsemblPlantsGene:Solyc04g045430.2 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF51 | PFAM:PF13837 | PFscan:PS50090 | UniParc:UPI000276621A | UniProt:K4BRH4 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4:-:33249282..33258886
Molecular Weight (calculated)
35220.2 Da
IEP (calculated)
6.733
GRAVY (calculated)
-0.910
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLERLTLIP STDSDGRLNG ADDSNKVPRL PRWTRQEILV LIQGKKVTEN RIRRGRTGVV ELGSPQVEPK WASVSSYCKR HGVNRGPVQC RKRWSNLAGD
101: FKKIKEWESQ IKEETDSFWV MRNDLRRDKK LPGFFDREVY DILDRGSGDA DAHEEGGLVL ALGSQVLFDS GKSAASGDDA LFSDFEPDET PHKPINDPPI
201: PTPVSEQQHQ PLSQVSPTQG TSQPTTREPD IGSGHEGRKR KKSESDADDE EARSVQHHLV RALERNGKLV SSQLEAQNMQ FEQDREQRKD HVDNLVAVLT
301: KLADALGRIA DKF
101: FKKIKEWESQ IKEETDSFWV MRNDLRRDKK LPGFFDREVY DILDRGSGDA DAHEEGGLVL ALGSQVLFDS GKSAASGDDA LFSDFEPDET PHKPINDPPI
201: PTPVSEQQHQ PLSQVSPTQG TSQPTTREPD IGSGHEGRKR KKSESDADDE EARSVQHHLV RALERNGKLV SSQLEAQNMQ FEQDREQRKD HVDNLVAVLT
301: KLADALGRIA DKF
001: MALEQLGLGV SAVDGGENSS APSNDGGDDG VKTARLPRWT RQEILVLIQG KRVAENRVRR GRAAGMALGS GQMEPKWASV SSYCKRHGVN RGPVQCRKRW
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
101: SNLAGDYKKI KEWESQIKEE TESYWVMRND VRREKKLPGF FDKEVYDIVD GGVIPPAVPV LSLGLAPASD EGLLSDLDRR ESPEKLNSTP VAKSVTDVID
201: KEKQEACVAD QGRVKEKQPE AANVEGGSTS QEERKRKRTS FGEKEEEEEE GETKKMQNQL IEILERNGQL LAAQLEVQNL NLKLDREQRK DHGDSLVAVL
301: NKLADAVAKI ADKM
Arabidopsis Description
ASR3Trihelix transcription factor ASR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.