Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001894_P001 | Maize | mitochondrion | 63.33 | 64.83 |
| KXG27398 | Sorghum | plastid | 61.54 | 62.02 |
| TraesCS2B01G579700.1 | Wheat | nucleus, plastid | 62.56 | 59.22 |
| TraesCS2D01G549900.1 | Wheat | nucleus, plastid | 61.54 | 58.68 |
| TraesCS2A01G549300.1 | Wheat | nucleus, plastid | 58.46 | 56.02 |
| KRH34785 | Soybean | cytosol | 8.97 | 47.3 |
| KRG91999 | Soybean | nucleus | 37.69 | 44.41 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 47.18 | 43.09 |
| Os03t0666300-00 | Rice | nucleus | 24.62 | 24.55 |
| Os02t0516800-00 | Rice | nucleus | 19.49 | 17.04 |
| Os04t0397500-00 | Rice | cytosol, nucleus | 2.56 | 15.38 |
Protein Annotations
| MapMan:35.2 | EntrezGene:9266435 | EMBL:AB920921 | ProteinID:ADK25308.1 | ProteinID:ADK25309.1 | ProteinID:ADK25310.1 |
| ProteinID:ADK25311.1 | ProteinID:ADK25312.1 | ProteinID:ADK25313.1 | ProteinID:ADK25314.1 | ProteinID:ADK25315.1 | ProteinID:ADK25316.1 |
| ProteinID:ADK25317.1 | ProteinID:ADK25318.1 | ProteinID:ADK25357.1 | ProteinID:ADK25358.1 | ProteinID:ADK25372.1 | ProteinID:ADK25373.1 |
| ProteinID:ADK25374.1 | ProteinID:ADK25375.1 | ProteinID:ADK25376.1 | ProteinID:ADK25377.1 | ProteinID:ADK25378.1 | ProteinID:ADK25379.1 |
| ProteinID:ADK25380.1 | ProteinID:ADK25381.1 | ProteinID:ADK25382.1 | ProteinID:ADK25383.1 | ProteinID:ADK25384.1 | ProteinID:BAH92865.1 |
| ProteinID:BAS91562.1 | ProteinID:CAE02832.1 | ncoils:Coil | InterPro:IPR017877 | InterPro:Myb-like_dom | EnsemblPlantsGene:Os04g0670900 |
| EnsemblPlants:Os04t0670900-00 | PFAM:PF13837 | PFscan:PS50090 | PANTHER:PTHR33492 | PANTHER:PTHR33492:SF2 | UniProt:Q7XR48 |
| UniParc:UPI00001B15DB | RefSeq:XP_015635337.1 | SEG:seg | : | : | : |
Description
SHATTERING 4Homeodomain-like containing protein. (Os04t0670900-00)
Coordinates
chr4:-:34231186..34233221
Molecular Weight (calculated)
41439.4 Da
IEP (calculated)
8.983
GRAVY (calculated)
-0.718
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSSADPSP SASTAGAAVS PLALLRAHGH GHGHLTATPP SGATGPAPPP PSPASGSAPR DYRKGNWTLH ETLILITANR LDDDRRAGVG GAAAGGGGAG
101: SPPTPRSAEQ RWKWVENYCW KNGCLRSQNQ CNDKWDNLLR DYKKVRDYES RVAAAAATGG AAAANSAPLP SYWTMERHER KDCNLPTNLA PEVYDALSEV
201: LSRRAARRGG ATIAPTPPPP PLALPLPPPP PPSPPKPLVA QQQHHHHGHH HHPPPPQPPP SSLQLPPAVV APPPASVSAE EEMSGSSESG EEEEGSGGEP
301: EAKRRRLSRL GSSVVRSATV VARTLVACEE KRERRHRELL QLEERRLRLE EERTEVRRQG FAGLIAAVNS LSSAIHALVS DHRSGDSSGR
101: SPPTPRSAEQ RWKWVENYCW KNGCLRSQNQ CNDKWDNLLR DYKKVRDYES RVAAAAATGG AAAANSAPLP SYWTMERHER KDCNLPTNLA PEVYDALSEV
201: LSRRAARRGG ATIAPTPPPP PLALPLPPPP PPSPPKPLVA QQQHHHHGHH HHPPPPQPPP SSLQLPPAVV APPPASVSAE EEMSGSSESG EEEEGSGGEP
301: EAKRRRLSRL GSSVVRSATV VARTLVACEE KRERRHRELL QLEERRLRLE EERTEVRRQG FAGLIAAVNS LSSAIHALVS DHRSGDSSGR
001: MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.