Factsheet for Os03t0666300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034953_P001	Maize	nucleus	26.09	50.0
TraesCS4D01G017200.2	Wheat	nucleus	28.39	33.64
HORVU4Hr1G002970.1	Barley	nucleus	28.64	33.63
EER93695	Sorghum	nucleus	30.95	33.61
TraesCS4A01G294700.2	Wheat	nucleus	27.37	32.42
TraesCS4B01G019200.1	Wheat	nucleus	27.37	32.33
VIT_10s0042g00940.t01	Wine grape	cytosol	20.97	27.99
GSMUA_Achr5P02140_001	Banana	nucleus	22.25	27.88
GSMUA_Achr4P32040_001	Banana	nucleus	24.3	27.86
Solyc02g069390.1.1	Tomato	nucleus	21.48	27.45
Solyc02g030460.2.1	Tomato	nucleus	21.74	25.15
PGSC0003DMT400033627	Potato	nucleus	21.48	24.85
Os04t0670900-00	Rice	nucleus	24.55	24.62
CDY02375	Canola	nucleus	21.99	23.63
CDX98246	Canola	nucleus	21.99	23.31
AT2G35640.1	Thale cress	nucleus	20.2	23.24
CDY49546	Canola	nucleus	21.74	22.97
CDX77554	Canola	nucleus	22.51	22.8
Bra014906.1-P	Field mustard	nucleus	22.51	22.8
Bra023175.1-P	Field mustard	nucleus	21.74	21.96
AT1G31310.1	Thale cress	nucleus	21.23	21.67
Os02t0516800-00	Rice	nucleus	17.9	15.7
Os04t0397500-00	Rice	cytosol, nucleus	2.3	13.85
PGSC0003DMT400054486	Potato	nucleus	4.35	13.18

Protein Annotations

EnsemblPlants:Os03t0666300-00	EnsemblPlantsGene:Os03g0666300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:Myb-like_dom	PANTHER:PTHR33492	PANTHER:PTHR33492:SF6	PFAM:PF13837
PFscan:PS50090	ProteinID:BAS85639.1	SEG:seg	SUPFAM:SSF46689	UniParc:UPI000393AE06	UniProt:A0A0P0W1V1
MapMan:35.2	:	:	:	:	:

Description

Hypothetical conserved gene. (Os03t0666300-00)

Coordinates

chr3:+:26216771..26218206

Molecular Weight (calculated)

42489.2 Da

IEP (calculated)

11.883

GRAVY (calculated)

-0.816

Length

391 amino acids

Sequence
(BLAST)

001: MDADVLLGQE EDEETMNAAM AASTAGSAMA AAAREYRRGN WTLPETMLLV EAKKRVSDGR RPAADQGLAR WRWVEDYCWR RGCRRSQNQC NDRWDNLMRD
101: YKKVRAHELA AAGGGGGGGP AESYWVMGRT ERKEKGLPAN LLREIYDAMG EVVERRPMSS GGGGGGAVFL AGASSSGSGG LADCHLSCAD GHFCTVAWLT
201: RGDGELQLGV AGEEEEAAVA GQRATGGQHA TSDDRKAGSP RTRRRRRRVR SSWRRRELRR RRRPGRRDRA VRRDPVGGAG EPRGLGGAAA QGGGGRGGAA
301: RAGAAGAARG RRAVHGRARH RREPARRLHA RARRQAPGPR RSQVSSTITH ACTRIRSRRH AMRSRRRVGD ACEWLACLAA VFSWNLAGRL G

Best Arabidopsis Sequence Match ( AT2G35640.1 )
(BLAST)

001: MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.