Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G579700.1 | Wheat | nucleus, plastid | 89.49 | 88.83 |
| TraesCS2A01G549300.1 | Wheat | nucleus, plastid | 83.62 | 84.03 |
| Os04t0670900-00 | Rice | nucleus | 58.68 | 61.54 |
| Zm00001d001894_P001 | Maize | mitochondrion | 55.75 | 59.84 |
| KXG27398 | Sorghum | plastid | 54.03 | 57.11 |
| KRH34785 | Soybean | cytosol | 9.05 | 50.0 |
| KRG91999 | Soybean | nucleus | 37.41 | 46.22 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 42.54 | 40.75 |
| TraesCS4D01G017200.2 | Wheat | nucleus | 24.21 | 30.0 |
| TraesCS3D01G434100.1 | Wheat | nucleus | 17.6 | 24.66 |
| TraesCS5D01G450500.1 | Wheat | plastid | 17.36 | 19.72 |
| TraesCS2D01G286000.2 | Wheat | nucleus | 16.87 | 19.71 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G549900.1 | EnsemblPlantsGene:TraesCS2D01G549900 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil | PANTHER:PTHR33492 |
| PANTHER:PTHR33492:SF2 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2D:+:625457621..625459857
Molecular Weight (calculated)
43986.7 Da
IEP (calculated)
9.886
GRAVY (calculated)
-0.736
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASSDPSPS SSAAAAASAS PLAAYHAHPH HPHHHLHLST PPHAYPPAAP PPSPASAPRD YRKGNWTMHE TLILITAKRL DDDRRAGGGA GGVAMAGPSS
101: PPTPRSAEQR WKWVENYCWI NGCLRSQNQC NDKWDNLLRD YKKVRDYEAR RASIAAAAPP VDGAPAAQPQ TPLPSYWTME RHDRKERNLP TNLAPEVYDA
201: LLDVLSRRAA RRGGAAIAPA APAPLALPPP PPPPPPPPSP PKPLLDQQQQ QQQQKHHRLH PQPPPLLQLP APVPQPSVPS ATSVSAEEEM TGSSESGSAG
301: LGLGGMSGGV GGNGDEPEAK RRRRAERLGS SVVRSATVLA RTLVACEDRR ERRHREVLEL EERRLRLEAE RNEVRRQGFA GLVAAVNGLS GAIHALVADH
401: HGRSGDSSR
101: PPTPRSAEQR WKWVENYCWI NGCLRSQNQC NDKWDNLLRD YKKVRDYEAR RASIAAAAPP VDGAPAAQPQ TPLPSYWTME RHDRKERNLP TNLAPEVYDA
201: LLDVLSRRAA RRGGAAIAPA APAPLALPPP PPPPPPPPSP PKPLLDQQQQ QQQQKHHRLH PQPPPLLQLP APVPQPSVPS ATSVSAEEEM TGSSESGSAG
301: LGLGGMSGGV GGNGDEPEAK RRRRAERLGS SVVRSATVLA RTLVACEDRR ERRHREVLEL EERRLRLEAE RNEVRRQGFA GLVAAVNGLS GAIHALVADH
401: HGRSGDSSR
001: MADADPSSGE QIVMRECRKG NWTVSETLVL IEAKKMDDQR RVRRSEKQPE GRNKPAELRW KWIEEYCWRR GCYRNQNQCN DKWDNLMRDY KKIREYERSR
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
101: VESSFNTVTS SSYWKMDKTE RKEKNLPSNM LPQIYDVLSE LVDRKTLPSS SSAAAAVGNG NGGQILRVCQ QSLGFVAPMM AQPMHQIPTT IVLSLPPPPP
201: QSLSLSLPSP PQPPPSSSFH AEPIPPTVGT SSTKRRRTTP GETTAGGERE VEEDAVGVAL SRCTSVITQV IRENEEGQER RHKEVVRLQE RRLKIEESKT
301: EINRQGMNGL VDAINQLASS ILALASSSCH NNRNHQGGPP
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.