CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27530	Soybean	nucleus	61.82	27.13
Os10t0561100-01	Rice	cytosol	47.88	23.87
KRH07194	Soybean	nucleus	24.24	12.54
KRH23756	Soybean	endoplasmic reticulum	24.85	12.5
KRH46629	Soybean	cytosol	24.24	12.16
KRH10765	Soybean	cytosol, peroxisome, plastid	23.64	12.0
KRG93310	Soybean	cytosol	23.03	11.88
KRG93311	Soybean	cytosol	23.03	11.8
KRG93306	Soybean	cytosol	23.03	11.8
KRG93309	Soybean	cytosol	22.42	11.56
KRG99627	Soybean	cytosol	23.03	11.55
KRH27297	Soybean	mitochondrion	25.45	11.54
KRH44933	Soybean	cytosol, peroxisome	20.61	11.41
KRH64241	Soybean	nucleus	23.64	11.27
KRH53690	Soybean	cytosol, peroxisome, plasma membrane	23.64	11.24
KRH22019	Soybean	mitochondrion	25.45	10.85
KRH45668	Soybean	nucleus	24.85	10.33
KRG99340	Soybean	plastid	24.24	10.13
KRH56616	Soybean	cytosol	1.21	1.87
KRG93308	Soybean	extracellular	1.21	1.13

Protein Annotations

Gene3D:3.90.180.10	MapMan:35.2	UniProt:A0A0R0I1N1	EMBL:ACUP02005375	InterPro:ADH_N	EnsemblPlantsGene:GLYMA_09G001200
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0003960	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0017091	GO:GO:0034599	GO:GO:0055114	InterPro:GroES-like_sf
EnsemblPlants:KRH36398	ProteinID:KRH36398	ProteinID:KRH36398.1	PFAM:PF08240	PANTHER:PTHR42975	SUPFAM:SSF50129
UniParc:UPI0006EDD6E2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:90789..91685

Molecular Weight (calculated)

18438.6 Da

IEP (calculated)

7.406

GRAVY (calculated)

0.048

Length

165 amino acids

Sequence
(BLAST)

001: MVKAIRVEQL GDPQVLKWED VEIGEAKEGE VRVRNKAVGV NFIDVYFRTR VYKVPSLPYT PGVEGVGEVT AVGVGVTDMK VGDIVAYSCQ PLGSYAEEHI
101: LPALQLVPLP PSIHPIVGAS IMSKGLTTRY LLQQCFKGVI RFRFMDQSIK PMDRADYRLF FYESV

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.