CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44069	Canola	extracellular	82.29	50.64
GSMUA_AchrUn_...	Banana	extracellular	73.96	31.28
KRH51669	Soybean	extracellular	62.5	23.81
KRH44992	Soybean	extracellular	62.5	23.17
KRH27987	Soybean	extracellular	56.25	20.77
KRH77459	Soybean	extracellular	56.25	20.77
KRH67777	Soybean	cytosol	34.38	20.75
KRH04002	Soybean	extracellular	56.25	20.38
KRH26080	Soybean	extracellular	53.12	19.92
KRH55327	Soybean	extracellular	53.12	19.84
KRH01265	Soybean	extracellular	44.79	18.86
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	58.33	18.67
KRH57276	Soybean	extracellular	43.75	18.34

Protein Annotations

EntrezGene:102662254	Gene3D:2.40.40.10	MapMan:21.4.2.1	EMBL:ACUP02002800	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	EnsemblPlantsGene:GLYMA_05G025600	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR036908	UniProt:K7KMI7	EnsemblPlants:KRH56899
ProteinID:KRH56899	ProteinID:KRH56899.1	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PANTHER:PTHR31867	PANTHER:PTHR31867:SF28	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685
UniParc:UPI0002962D7C	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2240341..2241955

Molecular Weight (calculated)

10194.8 Da

IEP (calculated)

5.354

GRAVY (calculated)

-0.148

Length

96 amino acids

Sequence
(BLAST)

1: MHVYGGACGY GNLYSQGYGT NTAALSTALF NNGSSCGACF EIKCASDQRW CHPDTVVVTA TNFCSPNNAL PNDAGGWCNP PLQHFDLSQP VFQQIA

Best Arabidopsis Sequence Match ( AT1G69530.1 )
(BLAST)

001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTGAQLR

Arabidopsis Description

ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.