CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01265	Soybean	extracellular	50.31	35.09
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	20.75	34.38
KRH51669	Soybean	extracellular	54.09	34.13
KRH77459	Soybean	extracellular	53.46	32.69
KRH04002	Soybean	extracellular	54.09	32.45
KRH44992	Soybean	extracellular	52.83	32.43
KRH27987	Soybean	extracellular	52.83	32.31
KRH26080	Soybean	extracellular	48.43	30.08
KRH55327	Soybean	extracellular	48.43	29.96
Zm00001d006399_P001	Maize	extracellular	47.8	29.34
KRH57276	Soybean	extracellular	42.14	29.26
Os12t0546800-01	Rice	plasma membrane	52.2	28.62
KXG36242	Sorghum	extracellular	48.43	28.31
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	19.5	21.23
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	19.5	20.81

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A0R0KLL6	EMBL:ACUP02002082	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_03G186600	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	EnsemblPlants:KRH67777	ProteinID:KRH67777	ProteinID:KRH67777.1	PFAM:PF01357	PFAM:PF03330
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF12	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI0006EDCC72	:	:

Description

hypothetical protein

Coordinates

chr3:-:39827010..39828345

Molecular Weight (calculated)

17574.0 Da

IEP (calculated)

9.607

GRAVY (calculated)

-0.416

Length

159 amino acids

Sequence
(BLAST)

001: MHAGGACGYD DVVKDGYGLD MAALSSVLFN HGDNGGWCNP PRQHFDLAKP AYLKIAQYKA GIVPVQYRRV PCKKQGGIRF TITGNPYFNL VEVWNVGGAG
101: DITKVQVKGD KKLLNWTNLK RNWGEKWETN AMLVGETLTF RVKASDGSFG QTFEGKNFP

Best Arabidopsis Sequence Match ( AT2G37640.1 )
(BLAST)

001: MTATAFRVGL WLAVTASFLL TATNAKIPGV YSGGPWQNAH ATFYGGSDAS GTMGGACGYG NLYSQGYGVN TAALSTALFN NGFSCGACFE IKCTDDPRWC
101: VPGNPSILVT ATNFCPPNFA QPSDDGGWCN PPREHFDLAM PMFLKIGLYR AGIVPVSYRR VPCRKIGGIR FTVNGFRYFN LVLVTNVAGA GDINGVSVKG
201: SKTDWVRMSR NWGQNWQSNA VLIGQSLSFR VTASDRRSST SWNVAPATWQ FGQTFSGKNF RV

Arabidopsis Description

EXPA3EXP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VPK3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.