CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006399_P001	Maize	extracellular	82.72	86.87
Os12t0546800-01	Rice	plasma membrane	72.43	67.93
KRH67777	Soybean	cytosol	28.31	48.43
EES02683	Sorghum	extracellular	36.76	39.37
EES02419	Sorghum	extracellular	36.4	39.13
EER91571	Sorghum	extracellular	35.29	37.94
EER94586	Sorghum	extracellular	36.03	37.12
KXG38462	Sorghum	extracellular	34.19	36.76
EER94179	Sorghum	extracellular	33.82	36.36
EER91570	Sorghum	extracellular	33.46	36.26
EES13271	Sorghum	extracellular	34.19	35.91
EES13270	Sorghum	extracellular	34.19	35.77
EES14420	Sorghum	extracellular	33.82	34.59
EES14433	Sorghum	plastid	34.56	33.81
EER89054	Sorghum	extracellular	33.46	32.97
EER94181	Sorghum	extracellular, plastid, vacuole	33.46	31.27
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	15.81	29.45
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	15.44	28.19
KXG29998	Sorghum	extracellular	18.38	26.32
KXG32172	Sorghum	extracellular	24.63	25.28

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1B6QE91	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KXG36242
ProteinID:KXG36242	ProteinID:KXG36242.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF12	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	EnsemblPlantsGene:SORBI_3002G305800	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0003C6AECC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:68078457..68079892

Molecular Weight (calculated)

29175.7 Da

IEP (calculated)

9.876

GRAVY (calculated)

-0.446

Length

272 amino acids

Sequence
(BLAST)

001: MSGRRRRSWT IWAPLLASLL LAGLALSAKV VDEEAEADGD DGGGASKKKK PHVNHGKFKA DPWTDGHATF YGGRDGSGTT DGGACGYKGE LGKDYGALTA
101: AVGPSLYTNG AGCGACYELK GSKGTVVVTA TNQAPPPVSG QKGEHFDLTM PAFLKIDEEK AGIVPITYRK VACARQGGIR YTITGNPNYN MVMVTNVGGA
201: GDVVALSVKG NKRVKWTPMK RSWGQLWITE VNLTGESLTF RVMTGDHRKA TSWHVAPRDW KYDKTYQATK NF

Best Arabidopsis Sequence Match ( AT2G37640.1 )
(BLAST)

001: MTATAFRVGL WLAVTASFLL TATNAKIPGV YSGGPWQNAH ATFYGGSDAS GTMGGACGYG NLYSQGYGVN TAALSTALFN NGFSCGACFE IKCTDDPRWC
101: VPGNPSILVT ATNFCPPNFA QPSDDGGWCN PPREHFDLAM PMFLKIGLYR AGIVPVSYRR VPCRKIGGIR FTVNGFRYFN LVLVTNVAGA GDINGVSVKG
201: SKTDWVRMSR NWGQNWQSNA VLIGQSLSFR VTASDRRSST SWNVAPATWQ FGQTFSGKNF RV

Arabidopsis Description

EXPA3EXP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VPK3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.