CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	13.58	57.14
HORVU1Hr1G036910.1	Barley	extracellular	18.87	40.65
EES02419	Sorghum	extracellular	35.85	37.55
EES02683	Sorghum	extracellular	35.47	37.01
EER91571	Sorghum	extracellular	34.72	36.36
EER91570	Sorghum	extracellular	33.58	35.46
KXG38462	Sorghum	extracellular	33.21	34.78
EER94179	Sorghum	extracellular	33.21	34.78
CDY44426	Canola	extracellular	15.85	34.71
EER94586	Sorghum	extracellular	31.32	31.44
EER94181	Sorghum	extracellular, plastid, vacuole	34.34	31.27
EES13271	Sorghum	extracellular	30.19	30.89
EES13270	Sorghum	extracellular	29.81	30.38
EES14433	Sorghum	plastid	30.19	28.78
KXG29998	Sorghum	extracellular	19.62	27.37
EES14420	Sorghum	extracellular	26.79	26.69
TraesCS7B01G293800.1	Wheat	extracellular	19.25	25.37
KXG36242	Sorghum	extracellular	25.28	24.63
EER89054	Sorghum	extracellular	23.77	22.83

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	UniProt:A0A1B6Q2N3	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112
InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KXG32172	ProteinID:KXG32172	ProteinID:KXG32172.1	PFAM:PF03330
PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867	PANTHER:PTHR31867:SF36	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3003G111800	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00081ABE7C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:10043385..10044397

Molecular Weight (calculated)

28306.0 Da

IEP (calculated)

12.095

GRAVY (calculated)

-0.201

Length

265 amino acids

Sequence
(BLAST)

001: MAKSLALLAL SAFFFFLLGG SVAAAQWTPA FATFYGGSDA SGTMGGACGY GNLYNAGTAL FNDGAMCGAC FAIACDARRS RWCKPGTGGA RRRSITVTAH
101: QPVPAQLGAA GRAATRGRPA FEAIAVYRAG IVPVSYRAAC RAAAGPAASG SPCGETQLLR ARHRRQRRRQ RRRGAGLDQG RRRHGLDAHD PQLGRQLAEQ
201: RVPQRAEPLV PPQVRRHGRV VTAYNVAPAG WWFGATYTSN APVLAIDLTT VLFARSGRRA FHRRL

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.